Rhodococcus sp. JVH1: JVH1_22355
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Entry
JVH1_22355 CDS
T10360
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rhoj Rhodococcus sp. JVH1
Pathway
rhoj00010
Glycolysis / Gluconeogenesis
rhoj00020
Citrate cycle (TCA cycle)
rhoj00260
Glycine, serine and threonine metabolism
rhoj00280
Valine, leucine and isoleucine degradation
rhoj00310
Lysine degradation
rhoj00380
Tryptophan metabolism
rhoj00620
Pyruvate metabolism
rhoj00630
Glyoxylate and dicarboxylate metabolism
rhoj00640
Propanoate metabolism
rhoj00670
One carbon pool by folate
rhoj00785
Lipoic acid metabolism
rhoj01100
Metabolic pathways
rhoj01110
Biosynthesis of secondary metabolites
rhoj01120
Microbial metabolism in diverse environments
rhoj01200
Carbon metabolism
rhoj01210
2-Oxocarboxylic acid metabolism
rhoj01240
Biosynthesis of cofactors
Module
rhoj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhoj_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhoj_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
rhoj_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rhoj_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
JVH1_22355 (lpdA)
00020 Citrate cycle (TCA cycle)
JVH1_22355 (lpdA)
00620 Pyruvate metabolism
JVH1_22355 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
JVH1_22355 (lpdA)
00640 Propanoate metabolism
JVH1_22355 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JVH1_22355 (lpdA)
00280 Valine, leucine and isoleucine degradation
JVH1_22355 (lpdA)
00310 Lysine degradation
JVH1_22355 (lpdA)
00380 Tryptophan metabolism
JVH1_22355 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JVH1_22355 (lpdA)
00670 One carbon pool by folate
JVH1_22355 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhoj04147
]
JVH1_22355 (lpdA)
Enzymes [BR:
rhoj01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
JVH1_22355 (lpdA)
Exosome [BR:
rhoj04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
JVH1_22355 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
HI0933_like
AlaDh_PNT_C
3HCDH_N
FAD_binding_2
GIDA
Lycopene_cycl
Amino_oxidase
NAD_binding_8
DAO
2-Hacid_dh_C
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
XEM90895
LinkDB
All DBs
Position
1:4847429..4848802
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AA seq
457 aa
AA seq
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MSHRSADVVILGGGSGGYAAAIRSAELGRSVILVEENELGGTCLHQGCIPTKALLHSAEV
ADSARTASQFGVDVTFDGVDLEKVLSYQNTIVTRLHKGLQGLVDSHGITVVNGRGRLVGP
NGVEVDDELITGAAVVLATGSSPKTLPGISIGGRIVTSEQALVLPSVPKKAIILGGGVIG
VEFASVWASFGASVTIVEAMPRLVPNEDETTSKYLERAFRRRKIAAKTGVRVTEVTQDED
AVSVTLDSGDVLDADVVLVAVGRGPNTASMGYEETGVMLDKGFVVTSDRLRTTVPNVFAV
GDIVPGLQLAHRGFQQGIFVAEEIAGLRPDVVDETGIPRVTYSHPEVASVGLTETAAREK
FGENVETVIYDLAGNGKSQILKTSGAVKLVVAPTGVVVGVHMVGDRVGELIGEAQLLYNL
EVDAAQAAKFVHAHPTQGEALGEALMAVAGKPLHVHG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaccgatctgcagatgtcgtcatcctcggcggcggttccggcggctacgcggcc
gccatccgctcggccgaactgggccgttcggtcatcctcgtcgaagagaacgaactcggc
ggcacgtgcctgcatcaggggtgcattccgacgaaggcgctgctgcactccgccgaggtc
gccgacagtgcccgcaccgcctcgcagttcggtgtcgacgtcacgttcgacggtgtcgac
ctcgagaaggtcctgagctaccagaacaccatcgtcacccgactgcacaaaggactgcag
ggcctcgtcgactcgcacggcatcaccgtcgtcaacggccgcggacggttggtcggaccc
aacggagtggaggtcgacgacgagctgatcacgggcgccgccgtcgtcctggcgacgggg
tcgtcgccgaagacgctgcccggcatcagcatcggcggccggatcgtcaccagcgaacag
gcgctcgtgctgccgtccgtcccgaagaaggcgatcatcctgggcggcggcgtcatcggc
gtcgaattcgccagtgtctgggcgtcgttcggtgcgtcggtgacgatcgtcgaggcgatg
ccgcggctggtgccgaacgaggacgaaacgacctccaagtacctcgagcgggcattccgt
cgtcgcaagatcgccgcgaagacaggtgtgcgggtgacggaggtgacgcaggacgaggat
gcggtgtccgtcaccctcgactccggcgacgtgctcgacgccgacgtcgtgctggtcgca
gtggggcgcggacccaacaccgcgtcgatggggtacgaggagaccggagtgatgctcgac
aagggcttcgtggtgaccagtgatcgactgcgcaccacggtcccgaacgtcttcgcggtc
ggcgacatcgtccccgggctccagctggcccaccgcggtttccagcagggcatcttcgtg
gccgaggagatcgccgggctccgtccggacgtcgtcgacgagaccgggatcccgcgggtc
acctactcccaccccgaggtcgcgtccgtcgggttgaccgagaccgccgcccgggagaag
ttcggcgagaacgtcgagaccgtaatctacgatctcgccggcaacggcaagagccagatc
ctgaagacgtcgggggcggtcaaactcgtggtggcgccgaccggggtcgtcgtcggcgtg
cacatggtcggcgaccgcgtcggtgagctgatcggtgaggcgcagctgctctacaactta
gaggtcgatgccgcgcaggcggcgaagttcgtgcacgcccaccccacccagggcgaggcg
ctcggtgaggcactgatggcagtggccggcaagcctctccacgtccacggctga
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