KEGG   Rhodococcus sp. JVH1: JVH1_23610
Entry
JVH1_23610        CDS       T10360                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rhoj  Rhodococcus sp. JVH1
Pathway
rhoj00061  Fatty acid biosynthesis
rhoj00071  Fatty acid degradation
rhoj01100  Metabolic pathways
rhoj01212  Fatty acid metabolism
rhoj02024  Quorum sensing
rhoj04146  Peroxisome
Module
rhoj_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rhoj00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    JVH1_23610
   00071 Fatty acid degradation
    JVH1_23610
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    JVH1_23610
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    JVH1_23610
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rhoj01004]
    JVH1_23610
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhoj04147]
    JVH1_23610
Enzymes [BR:rhoj01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     JVH1_23610
Lipid biosynthesis proteins [BR:rhoj01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   JVH1_23610
Exosome [BR:rhoj04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   JVH1_23610
  Exosomal proteins of breast cancer cells
   JVH1_23610
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: XEM91127
LinkDB
Position
1:complement(5110290..5111999)
AA seq 569 aa
MPTSPSSDLTALESALAEIRELQDAAWPPQVPRTVEYPIEGRTVIDYLRHWATERPQTVA
IDFYGRAITYAELDELSDRFAGWLLQRGAAAGDRVGVHLTNCPQFHVAMLGILKIGAVHV
PINPLFREHELAYELDDAGVEILLTQDSFAAMVDCVRDQTALRHVAITALSDLLPAEPSV
APPFPLTSAPTDWAQIMNSARAEPIPMDSDALAALNYTGGTTGMPKGCEHTQAHMVYTAA
TATLAGGRQVGEARPVVLGFLPIFWIAGEDFGILYPLINGGTVVLLNRWDPDAAATLVDS
RGVTSMVGTVDNYVELMDLPGFAERDFSTLDNAMAVSFVLKLDPAIRGRWRDATGHVLRE
ASYGMTETHTADTITLGFQTDDEDLLSEPVFCGLPVPGTDVLIVDDAGAPVPVGQAGQIV
VRSPSLLTGYYGKPDATAAALRDGWLQTGDVGKLNGKGALHYLARNKEMIKTNGMSVFPS
EVEALLMLHPDIQSAAVVPKPDPGKGQVPFAFVQLLPDRQVSGEELQEWAALNMATYKVP
TVEVLDALPMTATGKVRKADLFALAEEYK
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgcccacttcgccttcgagtgacctcacggccctggaatcggccctcgccgagatacgc
gaactccaggacgccgcgtggccaccgcaggtaccgcggacagtcgagtacccgatcgag
ggccgcaccgtgatcgactacctgcgacactgggcgacggaacgaccgcagaccgtcgcg
atcgacttctacggtcgtgccatcacctacgccgaactcgacgaactgtccgaccgcttc
gccggctggctcctgcagcggggcgcggccgccggcgaccgcgtcggcgtccacctcacc
aactgtccgcagttccatgtggcgatgctcgggatcctgaagatcggcgccgtccacgtc
ccgatcaatccactgttccgggagcacgaactggcgtacgaactcgacgacgccggcgtg
gagatcctgctgacgcaggattcgttcgcggccatggtcgactgcgtgcgcgaccagacg
gcgttgcggcacgtcgcgatcaccgccctgtcggacctgctgcccgccgaacccagcgtc
gcaccgccgttccccctcacctccgcacccaccgactgggcgcagatcatgaactccgca
cgcgccgagccgattccgatggattccgacgcgttggcggcactgaactacaccggcggc
accaccgggatgccgaagggctgcgaacacacgcaggcgcacatggtctacaccgccgcc
accgcgacactggccggcggcaggcaggtgggcgaggctcgcccggtggtcctcgggttc
ctgcccatcttctggatcgccggcgaggacttcggcatcctgtacccgctgatcaacggc
ggcaccgtcgtgctcctcaaccgctgggacccggacgccgcggcgaccctcgtcgacagt
cgtggggtgacgtcgatggtcgggacggtcgacaactatgtcgaactgatggatctgccc
ggcttcgccgaacgagacttctccacgctggacaacgcgatggccgtgtcgttcgtgctg
aagctcgaccccgcgattcgcggccgctggcgcgacgccaccggccacgtgctacgggaa
gccagttacgggatgacggagacgcacaccgccgacaccatcacgctcggcttccagacc
gacgacgaagacctgctcagcgaacccgtgttctgcggacttccggttccgggcaccgac
gtgctgatcgtcgacgatgccggggcgcccgtgccggtggggcaagccggacagatcgtc
gtgcgcagtccgtcgctgctcaccggttactacggcaaacccgacgccaccgctgccgcg
ctccgcgacggatggctccagaccggcgacgtcggcaagctgaacggcaaaggcgcactg
cactatctggcgcgcaacaaggaaatgatcaagaccaacggaatgagcgtgttcccctcc
gaggtcgaggcactgctcatgctgcaccccgacatccagtcggccgcggtggtgccgaag
cccgatccgggcaaaggccaggtgccgttcgcgttcgttcagctcctgcccgaccgtcag
gtctcgggagaggaactgcaggagtgggccgccctgaacatggccacctacaaggtgccc
accgtagaggtgctcgacgccctacccatgacggcgaccgggaaggtccgcaaggccgac
ctgttcgccctggccgaggagtacaagtga

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