Rhodococcus sp. JVH1: JVH1_24685
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Entry
JVH1_24685 CDS
T10360
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rhoj Rhodococcus sp. JVH1
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhoj03000
]
JVH1_24685
Transcription factors [BR:
rhoj03000
]
Prokaryotic type
Helix-turn-helix
Other families
JVH1_24685
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_8
AAA_lid_14
HTH_23
GAF
HTH_30
HTH_28
AAA_22
AAA_14
nSTAND3
HTH_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
XEM91321
LinkDB
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Position
1:5315985..5317640
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AA seq
551 aa
AA seq
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MTGHAAMRPEIALSWKRSALSGLEPSSTPTDDPCSDLDKSSRLLQAARPVLDEMEQQIQG
TGFCVLLADRDCRIVARLFDGPRLERLIDGAGAVLGSRFDEDCVGTTALGTPMEVRRGVV
IHGEEHYLERFKELSCYGHPIVHPVTRRVEGILDMTGVASRANPLFAPFLARAAADIERR
LLEGARVSQQRLVDAFQRVSPQNLMAVTAIGEDILLSNRVALDLLQVSDHATLRGLAADL
RPDQSKTVRIQLSSGEPALVRADHVAGTDGGAVFVVRPDRRTSTPIRRGKSPSSSVVERS
RSELSRLRETRDPVVISGEPGIGRTTAVRDLAGDKSLVCMDAAAIALDGADAWIDRLLTL
AAGPAAVLAIEEVQLLPESMLPLVVKMLAADAGPRIVMTSSPLGDLPPGVAGLVGRCPGQ
VVLPPLRQRTREFADIAQGILDSVDPGLRLTASALDALIARDWPGNIAELFVVLQAAAGR
RSSANIAVADLPDQYRTPTRVSRLAGRERAERQAIVDALQECGGNKVHAAAALGISRSTL
YVRIRALDITV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggcacgcggcgatgcggccggagatcgcgttgtcctggaagcgttcggcgctc
agcggtctggaaccgagttcgacgccgaccgatgatccctgctccgacctggacaagtcc
agtcgcctgctgcaggcggcccgtcccgtgctcgatgagatggaacagcagatccagggc
accggcttctgtgtcctgctcgccgaccgtgactgccgcatcgtcgcccggctcttcgac
ggcccccgactcgagcgcctgatcgacggcgccggggcggtgctggggtcgcggttcgac
gaggactgcgtggggaccacggcgctggggacgccgatggaggtccggcgtggcgtcgtc
atacacggcgaggagcactacctcgagcggttcaaggaactcagctgttacggacacccg
atcgtccatccggtgacgcgccgcgtcgagggcatcctcgacatgacgggtgtcgcgtcg
cgcgccaacccgctgttcgccccgttcctggcccgagcggccgcggacatcgaacgacgt
ttgctcgagggggcccgggtgtcgcagcagcggctcgtggacgcgtttcagcgggtgtcg
ccgcagaatctgatggcggtcaccgcgatcggcgaggacattctgctcagcaaccgggtg
gcgctcgacctgctccaggtgtccgatcacgcgacgctgcgggggcttgccgcggacctg
cgtccggatcagtcgaagacggtgcggatccaactgtcctcgggcgaaccggcgttggtc
cgggccgaccacgtggcaggcacggacggcggggccgtgttcgtcgtccggccggaccgc
cggaccagcacccccatccggcgcggcaagtccccgtcgagttccgtcgtcgaacgcagc
aggtcggagttgtcgcggctgcgcgagacccgggatccggtggtgatcagcggcgaaccg
ggcatcggcaggacgacggcggttcgcgatctggccggcgacaagtcgctcgtatgtatg
gacgcggccgccatcgccctcgacggcgccgacgcctggatcgaccgacttctcacgctg
gcggccggacccgccgcggtcctggcgatcgaggaagtgcaactgctacccgagtcgatg
ctgccgctggtcgtgaagatgctggccgccgacgcgggtccacgaatcgtgatgacgagt
tctcccctcggcgacctgccaccgggcgttgcgggtctcgtcggccgctgccccggacag
gtggtgctcccgccgctgcgtcaacgcacccgcgaattcgcggacatcgcgcagggaatc
ctcgattccgtcgatcccggtctccggctcaccgcgagcgcgctcgacgctctgatcgcc
cgcgactggccgggcaatatcgccgaactgttcgtcgtgctgcaggccgccgcgggcaga
cgcagcagcgcgaacatcgctgtcgcggatctacccgaccagtatcggacgccgacccgg
gtgtcccggctggccggccgcgagcgcgccgaacgccaggccatcgtcgacgcactgcag
gagtgcggcggcaacaaggtgcatgccgcggccgcgctgggcatcagccgcagcacgctc
tacgtccggatccgagccctcgatatcaccgtctag
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