Rhodococcus sp. JVH1: JVH1_24815
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Entry
JVH1_24815 CDS
T10360
Symbol
shiA
Name
(GenBank) shikimate transporter
KO
K08172
MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
Organism
rhoj Rhodococcus sp. JVH1
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhoj02000
]
JVH1_24815 (shiA)
Transporters [BR:
rhoj02000
]
Major facilitator superfamily (MFS)
Organic acid transporters
Metabolite:H+ symporter (MHS) family [TC:
2.A.1.6
]
JVH1_24815 (shiA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_2
Motif
Other DBs
NCBI-ProteinID:
XEM91345
LinkDB
All DBs
Position
1:5347851..5349209
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AA seq
452 aa
AA seq
DB search
MSDHAFTPAAEKQARRAALSSFVGAVIDWYDFLLYGLVAALVFNSEFFPNVSPAIGTLAA
FATFGVGFLFRPLGGVVFGHYGDRIGRKRMLILTVLIMGTSTALIGLLPSFGSIGWWAPV
LLVTLRAVQGFAVGGEWGGAALMAVESAPPKKKAFYSSGVQVGYSVGLILATGFVMLMSN
LTTEDAFSQWGWRVPFVASVVLVGIGLWIRAGVQESPEFVGKVEKVEEEQTAQDKKRIPL
VEALRNHPKAFLQIIGLRFAELFSMYIVTTFALSYSTHELGMERNFMLNVGLLVGAVGIG
TIPLFAWLSDRHGRRRVYILGALIGAVCAFPFFIFLENGSMIGTVILAVLLVNISHDMVV
SVQQPLFTEMFGAEYRYSGAGVGYQVASAIGGGFTPFIAAALVTASGGSWHLVAVYLAGG
CIVSALIAWRLQPDASADTTDAATPAKLENAH
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcacgccttcaccccggcagccgagaagcaggcgcgaagagcagcgctgagc
agtttcgtcggcgcggtcatcgactggtacgacttcctgctctacgggctggtcgcggca
ctggtcttcaactcggagttcttcccgaacgtcagcccggcgatcggcacgctcgccgcg
ttcgcgacgttcggcgtcgggttcctgttccggccgctcggcggcgtcgtgttcggccac
tacggcgaccgcatcggacgcaagcggatgctgatcctgaccgtgctgatcatgggcacg
agcaccgccctgatcgggctgctgccgtcgttcgggtcgatcggctggtgggcaccggtc
ctgctcgtcaccctccgcgccgtccagggcttcgccgtcggcggcgagtggggtggagcc
gcgctgatggccgtcgagagcgcgccgccgaagaagaaggcgttctacagcagcggagtg
caggtcggttactcggtggggctcatcctcgccaccggattcgtcatgctcatgagcaac
ctgaccaccgaggacgcgttcagccagtgggggtggcgggttccgttcgtcgccagcgtc
gtcctggtcggtatcggtctgtggatccgcgccggcgtgcaggagagccccgagttcgtc
ggaaaggtcgagaaggtcgaggaggagcagaccgcgcaggacaagaagcggattccgctc
gtcgaggcactgcgcaaccacccgaaggcattcctccagatcatcggtctgcgtttcgcc
gaactgttctccatgtacatcgtgaccacgttcgcgttgagctactccacccacgaactg
gggatggaacgcaacttcatgctcaacgtcggcctgctcgtcggtgcggtgggtatcggc
accatcccgctgttcgcgtggctgtccgacaggcacggccggcggcgggtctacatcctc
ggcgccctgatcggcgcggtgtgcgcgttcccgttcttcatcttcctcgagaacgggtcg
atgatcggcaccgtcatcctcgccgtgctcctcgtcaacatctcgcacgacatggtcgtc
agcgtgcagcagccgctgttcaccgaaatgttcggggccgaataccgctacagcggcgcg
ggcgtcgggtaccaggtggccagcgcgatcggcggcggcttcaccccgttcatcgcggcc
gccctcgtcaccgccagcggcgggtcctggcacctcgtggccgtgtacctcgccggcggc
tgcatcgtcagcgccctgatcgcgtggcgactgcagcccgatgccagtgccgacacgacg
gacgccgccacacccgcgaagctcgagaacgcgcactga
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