Rhodococcus sp. JVH1: JVH1_26550
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Entry
JVH1_26550 CDS
T10360
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhoj Rhodococcus sp. JVH1
Pathway
rhoj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JVH1_26550 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoj03019
]
JVH1_26550 (groL)
03110 Chaperones and folding catalysts [BR:
rhoj03110
]
JVH1_26550 (groL)
03029 Mitochondrial biogenesis [BR:
rhoj03029
]
JVH1_26550 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhoj04147
]
JVH1_26550 (groL)
Enzymes [BR:
rhoj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
JVH1_26550 (groL)
Messenger RNA biogenesis [BR:
rhoj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JVH1_26550 (groL)
Chaperones and folding catalysts [BR:
rhoj03110
]
Heat shock proteins
HSP60 / Chaperonin
JVH1_26550 (groL)
Mitochondrial biogenesis [BR:
rhoj03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
JVH1_26550 (groL)
Exosome [BR:
rhoj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JVH1_26550 (groL)
Exosomal proteins of other body fluids (saliva and urine)
JVH1_26550 (groL)
Exosomal proteins of breast cancer cells
JVH1_26550 (groL)
Exosomal proteins of colorectal cancer cells
JVH1_26550 (groL)
Exosomal proteins of bladder cancer cells
JVH1_26550 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XEM91669
LinkDB
All DBs
Position
1:5733665..5735290
Genome browser
AA seq
541 aa
AA seq
DB search
MAKIIAFDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIE
KAVEAVTVRLLETAKEIDTKEQIAATAGISAGDPSIGELIAEAMDKVGKEGVITVEESNT
FGLQLELTEGMRFDKGYISAYFATDPERQEAVLEDAYILLVSSKISTVKDLLPLLEKVIQ
SGKPLVIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAQLADIAILTGGEVIS
EEVGLSLETAGLELLGQARKVVITKDETTIVEGAGDPEAIAGRVAQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQS
APALDDLKLEGDEATGANIVRVALEAPLKQIAFNAGLEPGVVAEKVRNLPAGHGLNASTN
EYGDLLEAGINDPVKVTRSALQNAASIAALFLTTEAVVADKPEKAGAPVGDPTGGMGGMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaagaggcccgtcgcggcctcgagcggggactcaac
gccctcgccgacgcagtcaaggtgacgttgggccccaagggtcgcaacgtcgtgctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtttccatcgccaaggagatcgag
ctcgaggacccctacgagaagatcggtgccgagctggtcaaggaggtcgccaagaagact
gacgacgtcgccggcgacggaaccaccaccgctaccgttctcgcccaggctctcgtccgt
gagggtctccgcaacgtcgctgccggcgccaacccgctgggtctgaagcgcggcatcgag
aaggccgtcgaggccgtcaccgtgcgtctgctcgagaccgccaaggagatcgacaccaag
gagcagatcgctgctaccgctggtatctccgcaggcgacccgtccatcggcgagctcatc
gccgaggccatggacaaggtcggcaaggaaggcgtcatcacggtcgaggagtccaacacc
ttcggcctgcagctcgagctcaccgagggcatgcgcttcgacaagggctacatctcggcg
tacttcgccaccgacccggagcgtcaggaagccgtcctcgaggacgcgtacatcctgctc
gtgagctccaagatctccacggtcaaggacctgctgccgctgctggagaaggtcatccag
tccggcaagccgttggtcatcatcgccgaggacgtcgagggcgaagccctgtccaccctg
gtggtcaacaagatccgtggcaccttcaagtccgtggccgtcaaggcccccggcttcggt
gaccgtcgcaaggctcagctcgccgacatcgccatcctcaccggtggcgaggtcatcagc
gaagaggtcggcctctccctggagaccgccggactcgagctgctcggccaggcacgcaag
gtcgtcatcaccaaggacgagaccaccatcgtcgaaggcgcgggagaccccgaggccatc
gccggtcgcgtggcgcagatccgcgccgagatcgagaacagcgactccgactacgaccgc
gagaagctgcaggagcgcctggccaagctggccggtggcgttgcagtcatcaaggccggc
gctgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaagatgccgtgcgtaac
gccaaggctgccgtcgaagagggcatcgtcgccggtggtggcgtggctctgctgcagtcg
gctcccgcgctcgacgacctgaagctcgaaggtgacgaggccaccggtgcgaacatcgtt
cgcgtcgccctcgaagcaccgctgaagcagatcgccttcaacgcgggcctcgagcccggc
gtcgttgccgagaaggttcgcaacctgcccgcaggtcacggcctcaacgcctcgaccaac
gagtacggcgacctgctcgaagccggcatcaacgacccggtcaaggtcacccgctccgcg
ctgcagaacgcagcgtccatcgcggctctgttcctgacgaccgaggccgtcgtcgccgac
aagccggagaaggccggagcgcccgtgggcgacccgaccggcggcatgggcggtatggac
ttctaa
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