Rhodococcus sp. JVH1: JVH1_29030
Help
Entry
JVH1_29030 CDS
T10360
Name
(GenBank) RNA-guided endonuclease InsQ/TnpB family protein
KO
K07496
putative transposase
Organism
rhoj Rhodococcus sp. JVH1
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
JVH1_29030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
Motif
Other DBs
NCBI-ProteinID:
XEM92139
LinkDB
All DBs
Position
1:6256199..6257341
Genome browser
AA seq
380 aa
AA seq
DB search
MAGRMVKRAFKYRFYPTAVQAEQLARTFGCTRYVYNRALAERTRAWSQERRRVTYADTSK
MLTGWKRDTETAWLSEPSKGPLQEALRQLQGAFDNFWRKQARYPRFKKKGQSKDSATYYS
NCFTYRGRQIRLAKQSEPLDIRWSRPLPEGTTPSQVTVSRNARGQYHISILVEDTITEPP
STDRVVGLDAGITSLYTLSTAEKIANPRHERKDRERLAKAQRVLAKKQKGSRNRAKARLR
VAKIHGRIADRRRDYLHKLSTRLVRENQVIAIEDLSVRNMVKNRSLSRAISDASWSEFRS
MLEYKADWYGRQVVAIDRFYPSSKTCSACGEVASTMPLTVREWTCRCGAVHDRDVNAAKN
ILAVGLTVAACGDGVRPPRT
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcggggagaatggtgaagcgggcgttcaagtaccgtttctatccgactgcggtgcag
gcggaacagcttgctcggacgttcgggtgcacccggtatgtctacaaccgggcgttggcc
gagcggacgcgtgcctggtcgcaggagcggcgtcgggtgacctacgcggatacctcgaag
atgctcaccggatggaagcgggacaccgagaccgcgtggttgtcggagccgtcgaagggg
ccgttgcaggaggcgctgcggcagttgcagggtgcgttcgacaacttctggcgcaagcaa
gcccgctacccgcgattcaagaagaagggccagtcgaaggattcggcgacctactattcg
aactgcttcacctaccgcggccggcagatccggttggccaagcagtccgaacccctggat
attcggtggtcgaggccgttaccggaggggaccacgccgtcgcaggtgacggtgtcgcgc
aatgctcgcggtcagtaccacatctcgattctcgtcgaggacacgatcaccgagcccccg
tcgaccgatcgggtggttgggctggacgccgggatcaccagcctctacacgctctcgacg
gcggagaagatcgccaacccgcgccatgagcgcaaggaccgtgagcggctggcgaaggcg
cagcgggtgctggccaagaagcagaagggatcccgtaaccgggccaaggcccgactaaga
gtcgcgaagattcatggccggatcgccgatcggcgtcgcgattatctgcacaaactctcc
actcggctggtgcgcgaaaatcaagtgatcgccatcgaggatctgagtgtgcggaacatg
gtcaagaatcggtcgttgtctcgggcgatctcggatgcgagttggtctgagttccggtcg
atgctcgagtacaaggccgactggtacgggcggcaggtggtggcgatcgaccggttttat
ccgtcgtcgaagacgtgctcggcgtgcggggaggtcgcctcgacgatgccgctgacggtc
cgggagtggacgtgccgatgcggcgccgtccacgaccgggatgtgaacgcggcgaagaac
attttggccgtcggactgacggttgcagcctgcggagacggtgtgagaccacctcgcaca
taa
DBGET
integrated database retrieval system
