Rhodococcus sp. JVH1: JVH1_29545
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Entry
JVH1_29545 CDS
T10360
Name
(GenBank) DEAD/DEAH box helicase
Organism
rhoj Rhodococcus sp. JVH1
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
XEM92233
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All DBs
Position
1:6359911..6362742
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AA seq
943 aa
AA seq
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MLHGLWTPGSGLMLWVEDRNPAAPEPTDAVGRVLARKFRHHVKVPMPTPSGPEMLEWAAV
ALAPPDATEFLLSVSSRDPRIAGDLRYLAHVARGVERWARAGRVVPEVHRAEGGWWPRWR
LLGGERQRAWLTELAVAMPPVQRHGTTPRAVLDDMVTELTDPVARRVLERRHPDDSGGDV
DHPLIDALVRGDQFAEGTAQLSGSLDGWRDSLKVDEPELVLRLLEPEDVDVEGDWDPDTV
LWRLEVCLRPEGEAPVPIPLHRTEASRLQIGVRKLTEAVAAYPRLQDVPSDPDSLDLMLP
TAVVIDLVGHGAVALKEKGISLLLPRAWSVASPSMRLRVSSPSTPASAENRAVGKDQLVQ
YNWELALGDTVLTAAEMNRLVNSKSDLVRLRGEWVRADQEVLSRAARYVAERHASGERAI
VDLLKDLIADDLSDLPVEEVTATGWAAALLDGDTKPQDVPTPDGLDATLRPYQKRGLDWL
VFMSRLGLGAVLADDMGLGKTLQLLALLAHEKAPTPTLLVCPMSVVGNWQREAARFVPSL
RVLVHHGPQRLSGAEFTAAVTQSDLVITTYALLARDVAHLKEQDWRRVVLDEAQHIKNAK
TSQARAARSIPAAHRVALTGTPVENRLDELRSILDFANSGILGSEAMFRKRFVVPIEREQ
DETAVARLRAVTSPFVLRRVKTDPAVIADLPDKFEMTVRANLTAEQAALYRAVVDDMMAQ
IKDKKGMKRKGAVLAALTKLKQVCNHPAHFLRDGSAVMRRGQHRSGKLGLVEDILDSVVA
DGEKALLFTQFREFGDLVTPYLAERFGTPVPFLHGGVSKQKRDDMVASFQGDDGPPIMML
SLKAGGTGLNLTAANHVVHLDRWWNPAVENQATDRAFRIGQRRDVQVRKLVCVGTLEERI
DAMIATKQELANLAVGTGENWVTEMSTEQLGELLRLGDEAVGE
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacggcctctggacaccgggttcgggtctcatgctgtgggtggaggatcggaat
ccggcagctccggagccgacggatgcggtcgggcgggtgctggcgcggaagttccggcat
cacgtgaaggtgccgatgccgacgccgtcggggccggagatgctcgagtgggccgcggtt
gcgctcgcaccaccggatgcgacggagttcctgctgtcggtgtcgtcccgcgacccccgg
atcgccggggatctgcgctacctcgcccacgtcgcccgcggtgtcgagcggtgggcacgg
gccgggcgggtggtgcccgaggtgcaccgggcggagggcggctggtggccgcgctggcgg
ctgctcggcggtgaacggcagcgtgcgtggctcacggagctggccgtggcgatgccgccg
gtccagcgtcacggcacgaccccccgggccgtgctcgacgacatggtcaccgagctgacc
gaccccgtcgcccgccgtgtcctcgaacgacggcacccggacgattccggcggcgacgtg
gatcatccgctgatcgacgcgctcgtgcggggtgaccagttcgccgagggcaccgcccag
ctgtcgggatcgctggacgggtggcgcgacagcctcaaggtggacgagcccgaactggtg
ctgcggctcctcgagccggaagacgtggacgtggagggggattgggacccggacacggtg
ctgtggcgactggaggtctgccttcgaccggaaggcgaagccccggtgccgattccgttg
caccgcacggaggcgagtcgtctgcagatcggggtgcgcaagctgacggaggccgtggca
gcctacccgcgactgcaggacgttcccagtgaccccgacagcctggacctgatgttgccc
accgccgtggtcatcgacctcgtcgggcacggtgcggtggcgttgaaggagaagggcatc
agcctgctgctgccgcgggcgtggagtgtggcgtcgccgtcgatgcgtctgcgggtgagc
tcgccgagcactccggcgagcgcggagaaccgggccgtcggcaaagaccagttggtgcaa
tacaactgggagctggcactcggcgacacggtgctcaccgccgcggagatgaatcgactg
gtcaactccaagagcgatctcgtgcggttgcgcggtgagtgggttcgggcggatcaggag
gtgctctcccgcgccgcgcgctacgtggcggagcggcacgccagcggcgagcgggccatc
gtggacctgctgaaggacctgatcgcggacgatctgtccgatcttcccgtggaggaggtc
acggccaccggctgggcggccgcgttgctggacggcgacacgaagccgcaggacgtgccg
accccggacgggttggacgccacgctgcgcccgtaccagaagcgggggctcgactggctg
gtgttcatgagccgtctcggcctcggggccgtcctcgccgacgacatgggactcggcaag
acgctgcagttgctggcgctgctggcacacgagaaggcgcccacgcccacgctgctggtg
tgcccgatgtcggtggtcggcaactggcagcgcgaggcagcgcgcttcgtcccctcgctg
cgggtgctcgtccaccacggtccgcagcggctgagcggcgcggagttcaccgccgccgtg
acacagagcgatctggtgatcaccacgtatgcgctgctggcccgcgacgtcgcgcacctg
aaggagcaggactggcggcgtgtcgtgctggacgaggcgcagcacatcaagaacgcgaag
acgtcgcaggcgcgggcggcgcggagcattccggcggcgcaccgcgtcgcgctgaccggc
actccggtcgagaaccgcctcgacgaactgcgctcgatcctcgacttcgcgaactcgggc
atcctgggctcggaggcgatgttccgcaagcgcttcgtggtgccgatcgagcgggagcag
gacgagacagccgtcgcccggctccgcgcggtcacgtccccgttcgtgctgcgccgggtc
aagaccgatcccgcggtcatcgccgacctccccgacaagttcgagatgacggtgcgcgcc
aacctcaccgcggagcaggccgcgctgtaccgggcggtggtcgacgacatgatggcgcag
atcaaggacaagaaggggatgaagcgcaagggcgccgtcctcgccgccctgacgaaactc
aagcaggtgtgcaaccacccggcacacttcctgcgcgacgggtcggcggtgatgcggcgc
ggacagcaccgctccggcaagctggggctcgtcgaggacatcctggattccgtggtcgcg
gacggcgagaaggcgttgctgttcacccagttccgggaattcggcgacctcgtcaccccg
tacctcgcggagcgtttcggtactcccgtgccgtttctgcacgggggcgtgtccaagcag
aagcgcgacgacatggtggcctcgttccagggcgacgacgggccgccgatcatgatgctc
tcgctgaaggcgggcgggacgggtttgaacctcaccgcggccaatcacgtcgtccacctc
gaccggtggtggaatccggcggtcgagaaccaggccacggacagggcgttccggatcggc
cagcggcgggacgtgcaggtgcgcaagctcgtgtgcgtcggcaccctggaggagcggatc
gacgcgatgatcgccaccaagcaggagctggccaatctcgccgtcgggacgggcgagaac
tgggtgacggagatgagcaccgaacaactgggcgaactgctccgcctcggtgacgaggcg
gtgggcgaatga
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