Rhodococcus sp. JVH1: JVH1_30930
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Entry
JVH1_30930 CDS
T10360
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rhoj Rhodococcus sp. JVH1
Pathway
rhoj03030
DNA replication
rhoj03430
Mismatch repair
rhoj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JVH1_30930 (holA)
03430 Mismatch repair
JVH1_30930 (holA)
03440 Homologous recombination
JVH1_30930 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhoj03032
]
JVH1_30930 (holA)
03400 DNA repair and recombination proteins [BR:
rhoj03400
]
JVH1_30930 (holA)
Enzymes [BR:
rhoj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JVH1_30930 (holA)
DNA replication proteins [BR:
rhoj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JVH1_30930 (holA)
DNA repair and recombination proteins [BR:
rhoj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JVH1_30930 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
XEM92492
LinkDB
All DBs
Position
1:6648459..6649436
Genome browser
AA seq
325 aa
AA seq
DB search
MSTPTQLEQLHLVLGDEEFLVERAVAQVISHVRANADVAAGADLPVNRLRAGDAGAAELA
ELLSPSLFAEDRVVVLEAAAEAGKDAVALILDAAGDPPPGVVLVVLHSGGGRAKAMTGAL
EKLGAVVHPCAKLKSGDLIGFIRGEFRTLGVRVSPEVVQSVFEGVGSNLRELAAACSQLT
ADTGGKIDVAAVQRYYSGKAEVSGFDVADKAVAGDTAGAIEALRWAMLRGVPHVLLADAL
ADAVHSIARVAPAGRGDPFRMASELGMPPWKIKKAQALAKGWTPTSVGEALRIVASLNAD
VKGAAADADYAVESAVGRVSRLRQV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgagcactccaactcagctcgaacagctccatctcgtcctcggtgacgaggagttcctc
gtcgaacgtgcggtggcgcaggtcatcagccacgtccgcgcgaacgcggatgtggccgcg
ggcgcggatcttcccgtcaaccggttgagggcgggcgatgccggggcggccgaactcgcc
gaactgctcagcccctccctgttcgccgaagaccgcgtggtggtgctcgaggccgcggcc
gaggcaggcaaggacgccgtggcactgatcctggacgcagccggcgacccgcctccgggt
gtcgtcctcgtcgtcctgcactcgggcggcggacgtgcgaaagcgatgaccggggcgctg
gagaaactcggagccgtggtgcacccgtgcgccaaactgaagtccggcgacctcatcggg
ttcatccgcggcgagttccgcaccctcggggtccgggtgtcgccggaagtggtgcagagc
gtgttcgagggggtgggttcgaatctgcgcgaactggccgccgcgtgctcgcagctcacc
gcagacaccggcggaaaaatcgatgtcgccgccgttcagcggtactactcgggcaaggcc
gaggtcagtggtttcgacgtcgcggacaaggccgtcgccggcgacaccgcgggcgcgatc
gaggcgctgcgctgggcgatgctgcggggcgtaccccacgtgctgctggccgacgcgctg
gccgatgcggtgcactcgatcgcccgggtggccccggcgggacggggagacccgttccgg
atggcgtcggaactcggcatgccaccctggaagatcaagaaggcgcaagccctcgcgaag
ggatggacacccacatcggtgggggaggcgctgcgcatcgtggcgtccctgaacgccgac
gtcaagggtgcggcggccgacgcggactacgccgtcgagagtgccgtcggacgcgtctcc
cggctacgccaggtctga
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