Rhodococcus sp. JVH1: JVH1_32195
Help
Entry
JVH1_32195 CDS
T10360
Name
(GenBank) polyprenyl synthetase family protein
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rhoj Rhodococcus sp. JVH1
Pathway
rhoj00900
Terpenoid backbone biosynthesis
rhoj01100
Metabolic pathways
rhoj01110
Biosynthesis of secondary metabolites
Module
rhoj_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
JVH1_32195
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
JVH1_32195
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rhoj01006
]
JVH1_32195
Enzymes [BR:
rhoj01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
JVH1_32195
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
JVH1_32195
2.5.1.29 geranylgeranyl diphosphate synthase
JVH1_32195
Prenyltransferases [BR:
rhoj01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
JVH1_32195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
XEM93957
LinkDB
All DBs
Position
1:complement(6882242..6883339)
Genome browser
AA seq
365 aa
AA seq
DB search
MEATLSVGTRPVALAAEVENALRDFFTSRQDLVDSVGGGYREAVTTLEDFVLRGGKRVRP
AFAWTGWVGAGGDARGPDAGPVLRACSALELVQACALVHDDIIDASTTRRGFPTVHVEFA
EQHRAGAWSGDSAHFGEGVAILLGDLALAWADDMIRESGITPDASARISPVWSAMRTEVL
GGQFLDISNEARADESIVAAMKVNRYKTAAYTIERPLHLGAALAGADDTLVSAYRRFGTD
IGIAFQLRDDLLGVFGDPAVTGKPSGDDLRAGKRTVLFAMSLQRADAEDPAAAALLREGI
GTDLSDSDVDTLRTTITSLGAVADVEKQIEELVGNALSTLAASTATTEAKQQLTEMAVAA
TRRDY
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
ctggaggcaacactgtccgttggaacgcgccccgtcgccctcgcggccgaggtcgaaaat
gcgcttcgcgacttcttcaccagccggcaggacctcgtcgactccgtgggtggtggttac
cgcgaggccgtgaccacgctcgaagacttcgtcctgcgcggaggcaagcgggtccgcccg
gccttcgcgtggaccggttgggtcggggcgggtggcgacgctcgtggccccgacgccgga
cccgtgctccgcgcctgctccgcgctggaactggttcaggcctgcgcgctggtccacgac
gacatcatcgacgcgtccacgacgcgtcgcgggttcccgaccgtccacgtcgagttcgcg
gaacagcaccgcgccggggcgtggagcggtgattccgctcacttcggcgagggcgtcgcg
atcctcctcggcgatctcgcgctggcctgggccgacgacatgatccgcgaatccggaatc
accccggacgcgtcggcccgcatctcccccgtctggtccgcgatgcgcaccgaggtgctc
ggcgggcagttcctcgacatcagcaacgaggcccgggcggacgagtcgatcgtcgccgcc
atgaaggtgaatcggtacaagacggccgcgtacaccatcgagcggcccctacacctcggt
gcggcgctcgcaggcgccgacgacaccctggtctcggcgtaccgccgattcggcaccgac
atcggtatcgccttccagctccgcgacgacctgctcggcgtgttcggcgatccggccgtg
accgggaagccctccggcgacgacctgcgggcgggcaagcgcaccgtcctgttcgcgatg
tcgctgcagcgcgccgacgccgaagaccccgcggcggccgcgctcctccgcgagggcatc
ggcaccgatctgtcagattcggacgtggacaccctccggaccacgatcacgtccctcggc
gcggtcgcggacgtggagaagcagatcgaggaactcgtcgggaacgcgctgtcgacgctg
gcggcgagcaccgccactaccgaggcgaagcagcagctcaccgagatggccgtcgccgcg
acgcgccgcgactactga
DBGET
integrated database retrieval system
