Rhodococcus sp. JVH1: JVH1_32275
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Entry
JVH1_32275 CDS
T10360
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rhoj Rhodococcus sp. JVH1
Pathway
rhoj00470
D-Amino acid metabolism
rhoj00550
Peptidoglycan biosynthesis
rhoj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JVH1_32275 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JVH1_32275 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhoj01011
]
JVH1_32275 (murD)
Enzymes [BR:
rhoj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
JVH1_32275 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rhoj01011
]
Precursor biosynthesis
Amino acid ligase
JVH1_32275 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
AlaDh_PNT_C
MurD-like_N
2-Hacid_dh_C
NAD_binding_7
AdoHcyase_NAD
Motif
Other DBs
NCBI-ProteinID:
XEM92747
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Position
1:6899706..6901205
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AA seq
499 aa
AA seq
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MAEEHGGLDWLRGRSVLVAGAGVSGRATIEPLRDLGALVTVTDANVDALAECARLGAATV
PIDDLLAERDRVAEFALVVTSPGFRPDAPLLSLAAGDGVPIWGDIEFSWHVDRAGLYGPP
RRWLVVTGTNGKTTTTSMLQSILEAAELPSLACGNIGIPVLDALRQTEPRAEALAVELSS
FQLHWAPSVRPTAGAILNIAEDHLDWHGGMQPYIDAKARALTGEVAVLGLDDEVASSLFS
SSPAVRTLGFRLGVPAPGELGVEDGYLVDRAFADGERLAPAEGITPPGPAGLMDALAAAA
LARAIGVPPDAVAAGLAAHVVGPHRAALVAEVGGVTFVDDSKATNPHAARPSILAHERVV
WIAGGLLKGARVDDLVREVASRLAGAVLLGRDAMQIAESLARHAPEVPVVTVETGDDAGV
SAVPQTATHRVVLPADTDSDAVMGVVVREAAALATAGDSVVLAPAAASLDMFASYGHRGD
SFTDAVGRLDASDISRTLR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaggaacacggcgggctcgactggttgcggggtcgcagcgtcctcgtcgccggt
gcgggtgtctccggccgggccaccatcgaacctcttcgtgacctcggtgcgctcgtcacc
gtgaccgacgcgaacgtcgacgctctcgccgagtgcgcgcggctcggcgccgcgaccgtc
ccgatcgacgatctgctcgccgagcgggaccgggtcgccgagttcgcgctggtcgtgacg
agcccggggttccgcccggacgcgccgctgctctcgctcgccgccggggacggggtaccg
atttggggtgacatcgagttctcgtggcacgtggaccgggccgggctctacggcccgccg
cggcggtggctggtggtcaccggcaccaacggcaagaccacgacgacctccatgctgcag
tccatcctcgaggcggccgagctgccgagtctggcctgcggcaacatcgggattccggtc
ctcgacgccctgcggcagaccgagccacgggcggaggcgctggcggtcgaactctcgtcg
ttccagctgcactgggcgccgtcggtccggccgaccgcaggtgcgatcctcaacatcgcc
gaagatcatctggactggcacggcgggatgcagccgtacatcgatgcgaaggcccgcgcc
ctgaccggtgaggtcgcggtgctggggctcgacgacgaggttgcgtcctccctgttctcc
tcgtcccccgcagtccggaccctgggtttccggttgggtgtgccggcgccgggcgaactg
ggtgtcgaggacgggtatctcgtcgaccgcgcgttcgcggacggcgagcggctggccccg
gccgaggggatcaccccgcccgggcctgccggactgatggacgccctggccgcggcggct
ctggcccgggcgatcggagttccgccggacgccgtcgccgcaggtctggccgcccacgtc
gtgggcccgcaccgcgcggcactcgtcgccgaggtcgggggcgtgacgttcgtcgacgac
tccaaggccaccaatccgcacgccgcccgcccgtcgatcctcgcccacgagcgggtggtg
tggatcgccggtggtctgctgaagggggcgcgggtcgacgacctcgtccgggaggtggct
agtcgcctcgccggcgccgtcctgctgggccgcgatgcgatgcagattgcagagtccctt
gcgcgacacgcccccgaggttcccgtggtcactgtcgaaacgggagacgatgcaggtgtg
agtgcagtcccgcagaccgcgacgcaccgggtggtgctgccggcggacaccgacagcgac
gccgtgatgggtgtcgtcgtgcgtgaggcggcggcgctggcaacggcaggggattccgtc
gtcctggcgcccgcggcggcgtcgctcgacatgttcgccagttacggccaccggggggac
agcttcacggacgccgtaggcaggctcgacgcgtcggacatctccaggacgctgcgatga
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