Rhodococcus sp. JVH1: JVH1_41725
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Entry
JVH1_41725 CDS
T10360
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rhoj Rhodococcus sp. JVH1
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhoj03000
]
JVH1_41725
Transcription factors [BR:
rhoj03000
]
Prokaryotic type
Helix-turn-helix
Other families
JVH1_41725
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Ortholog
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GFIT
Motif
Pfam:
AAA_lid_14
HTH_8
Sigma54_activ_2
AAA_16
HTH_30
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
XEM94732
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Position
2:902883..904676
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AA seq
597 aa
AA seq
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MSFVEAVPQSLGGHAKGPDAEAVPLDDQQMPPGDPYHNSVESRSMAQTPDSADGDATVGP
QLLRPTIAMSWRRSQHFGLEPANHIVGPAKLEFDSSSRLLQAATPVLDSVRESLSGVRAG
GLLADSSGTIVGRFFGDADLAASTDRFGGCLGMPFDESRTGTNAIATCVETREPVTVVGE
EHFLECLKSFDCYGLPIINPVTRRLEGVIDLMVDTGFEHRQRRALEVVLDRMVREISMRF
LADYDPDVQQSLIAFHALVRRTDDPVVLFGRDFVLHNRRALDELSTSDLSELEQHAMAGG
HSTEARLTLESGREVAVQVASPSHGQAALLRVRSNVRERPPVPRTLGRTRSVSDRIDERL
DALAARRTPVLVIGERGTGRSRAAHRIAGESAVVISAADFEHEPMTDSTTALVIEEADCL
SSRAVAEVAETIRTASRRIVMTTVRDAGHKDIDYLGGLCTEWVELPPLRERLEDVAQIAN
AILRELHAGRAPQVRLSTPVIDLLRRHRWPGNLAELAAVLAEVSRRRSAGDISITDLPTR
YQRLSAVRSKLTPFEQAEWELIERTLVACDGNKVHTAKRLGISRSKLYARLRYFQIT
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgtagaagccgtcccgcaatctctcggcggacacgcaaagggtccggatgcc
gaggccgtacccctcgacgaccaacagatgccacccggtgatccatatcacaattcggta
gaatccaggtcaatggctcaaacccccgattcggccgatggcgatgccaccgtaggcccc
cagctccttcgacccacgatcgcgatgtcgtggcgccgatcccaacatttcggtctggaa
ccggccaaccatatcgtcgggcctgccaagttggagttcgattcttccagcagactgctc
caggcggctacaccggttctcgacagcgttcgcgagtcactgagcggtgttcgggcgggc
gggttgcttgctgattccagcggcaccatcgtcggccgattcttcggagatgcagacctc
gctgccagcaccgaccggttcggaggatgcctgggaatgccgttcgacgagtcccgcacg
gggaccaacgcgatcgcgacatgcgttgagacacgcgaacccgtgaccgtcgtcggtgag
gagcactttctggaatgcctcaagagcttcgactgctacggacttccgattatcaacccg
gtgactcgacgtctcgaaggcgtcatcgacctgatggtcgataccggatttgagcatcgg
cagcgtcgagcactcgaagttgtacttgaccggatggtgcgtgagatctccatgcgattt
ctcgccgactacgaccctgacgtccaacagtccctgatcgccttccatgctctggtgcgg
cgaaccgacgatccggtggtcctgttcggacgcgacttcgtcttgcacaatcgccgcgcg
ctcgacgaattgtcgacgtccgacctgtcagaactcgagcagcacgcgatggccggcgga
cactccaccgaggcgcgtttaactctcgagtcgggccgtgaagtggccgtccaggtggcc
agcccgagtcatggccaagcagcattgctccgtgtccgcagcaacgtacgcgagcgccca
ccggtgccacgtacgctcggccgaaccagatcggtatcggatcgaatcgacgaacgcctc
gacgccctcgccgcccggcgtaccccagtgctcgtgatcggcgagcgcggcaccggacgt
tcacgggccgcgcaccgcattgctggtgaaagcgcggtcgtgatctctgcggccgatttc
gagcacgagcccatgacagactcgacaactgctcttgtgatcgaagaggctgactgcctg
agttcccgtgccgtcgcggaggtggccgagacgattcgcaccgccagcagacgcatagtg
atgaccacggtgcgcgacgccggccacaaagacatcgactatctcggtggcttgtgcaca
gaatgggtcgagttaccgccgcttcgggagaggctggaggacgtagcgcaaatcgccaac
gctattttgcgtgagctccatgcgggtagggcgccccaggtacgcctctccactccggtc
atcgatctgttgcgccgccatcgctggccgggaaatctggccgaactagccgcagtgctg
gccgaggtcagcagacgacggagcgcaggcgacatctccatcactgatctccccactcga
tatcagcgcctgagtgcggtgcgatcgaaactgacgcccttcgaacaggccgagtgggaa
ctgatcgagagaacgctcgtcgcctgcgacggcaacaaagtacatacagccaaacgcctc
ggtataagccggtccaagctgtatgcccggctgcggtacttccagatcacctga
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