Rhodoluna sp. KAS3: RKAS3_00050
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Entry
RKAS3_00050 CDS
T09960
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rhok
Rhodoluna sp. KAS3
Brite
KEGG Orthology (KO) [BR:
rhok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhok03032
]
RKAS3_00050 (gyrB)
03400 DNA repair and recombination proteins [BR:
rhok03400
]
RKAS3_00050 (gyrB)
Enzymes [BR:
rhok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RKAS3_00050 (gyrB)
DNA replication proteins [BR:
rhok03032
]
Prokaryotic type
DNA Topoisomerases
RKAS3_00050 (gyrB)
DNA repair and recombination proteins [BR:
rhok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RKAS3_00050 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BDS48428
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All DBs
Position
5065..6996
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AA seq
643 aa
AA seq
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MSDSTYEAGNIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEIVDNSVDEALAGYCDTIN
VTITKDGWIRVKDNGRGIPVSTHPTEGISTVQVVLTILHAGGKFGGGGYAVSGGLHGVGA
SVVNALSTQLRVQVAREGFLWNQSYKIGVPDAPLAKGEPADYTGTQIEFLASPEIFETVE
YDYETLRARFQQMCFLNKGLRISLEDERTGRTDTYHYENGLRDYVEYLNVSKKNEIVNEE
IISFESETKEKNMSVEIAMQWTNAYNESVHTYANTINTHEGGTHEEGFRAALTSLLNKYA
REKNLLKEKDENLSGDDCREGLTCVISVKLSEPQFEGQTKTKLGNTEAKAFVQRVVNEEL
GDWLGRNPNVAKDIIRKAIQAATARHAARKAREATRRKGLLESGGMPGKLRDCSSRKPEL
SEIYLVEGDSAGGSAVRGRNPETQAILPLRGKVLNVEKARLDRALGNAEVQAIITAFGTG
IGEEFDVTKARYHKCILMADADVDGLHIRTLILTLLFRYMRPLIEHGYVYLAQPPLFKIK
WSNSEHQYVYSDAQRDKALADGAAAGKRIPKENAIQRYKGLGEMDYDELWDTTMDPDKRT
LLQVTLEDAALADEVFSTLMGEDVDARRSFIQQNAKDVRFLDI
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagcacttacgaagccggaaatatccaggtcctcgagggcctagaagcagtg
cgcaagcgccccggcatgtacatcggttctaccggcccgcgtggtttgcaccacttggtt
tacgaaatcgttgacaactctgttgacgaggcattggctgggtactgtgacaccatcaac
gtcactattaccaaagacggctggatccgcgtaaaagacaacggtcgcggtattccggtt
tctacccacccaactgagggcatctcaaccgttcaggttgttctgaccattcttcacgcc
ggcggtaagttcggcggtggcggttacgccgtttcaggtggtcttcacggtgtgggtgca
tcggtggtaaacgccctttctacccagctaagagttcaggttgcccgcgaaggtttcttg
tggaaccagagctacaagattggtgtgcctgatgccccgcttgccaagggtgagccagct
gattacaccggaacccagattgagtttttggccagtccagaaattttcgaaactgttgag
tacgactacgagacccttcgtgcccgcttccagcagatgtgtttcttgaacaagggcctg
cgcatctctctagaagacgagcgcaccggccgtaccgacacctatcactacgaaaacggt
cttcgcgactacgttgagtacctcaacgtttcaaagaagaacgagatcgtcaacgaagaa
atcatctcttttgagtctgagaccaaagagaagaacatgtcggttgagattgccatgcag
tggaccaacgcttacaacgagagcgtccacacctacgcaaacaccatcaacactcacgag
ggtggaacccacgaagagggcttccgcgccgcacttacatcgctgctaaataaatacgcc
cgcgagaagaacctgctcaaagaaaaagacgagaacctctctggtgacgactgccgcgaa
ggcctaacctgcgtgatctcggtaaagctttctgagcctcagtttgagggccagaccaag
accaagctgggcaacaccgaggccaaggcctttgtgcagcgcgtggtcaacgaagagctg
ggcgactggcttggccgcaacccaaacgttgccaaagacattattcgtaaggcaattcag
gctgctactgcccgccacgctgctcgcaaggcacgcgaggctacccgccgcaagggattg
ctagagtctggcggtatgccgggcaagcttcgcgactgctcaagccgcaagccagaactt
tcagaaatctacctggttgagggtgactctgcgggtggttcagccgttcgtggccgcaac
ccagagacccaggcaatcttgcctctgcgcggtaaggtcttgaacgtcgagaaggcccgt
ctagaccgtgccctcggaaatgccgaggttcaggcaatcatcacagctttcggtaccggc
atcggtgaagaatttgatgtcactaaggcccgctaccacaagtgcattttgatggccgac
gccgatgttgacggtctgcacatccgcaccctgattcttaccctgcttttccgctacatg
cgcccactcattgagcacggatacgtttacttggcccagccaccgctattcaagatcaag
tggtcaaactcagagcaccagtacgtttactcagacgcccagcgtgacaaggccttggcc
gacggcgccgcagctggcaagcgtattcctaaagaaaacgccatccagcgttacaagggt
ttgggtgagatggactacgacgaactttgggacaccaccatggacccagacaagcgcacc
ttgcttcaggtaactctcgaagatgcagccctggctgatgaggtcttctcaaccctgatg
ggtgaagacgtagatgctcgccgctcattcattcagcagaacgcaaaggatgtccgcttc
ctagacatctag
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