Rhodoluna sp. KAS3: RKAS3_01720
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Entry
RKAS3_01720 CDS
T09960
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rhok
Rhodoluna sp. KAS3
Pathway
rhok03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhok00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RKAS3_01720 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhok03021
]
RKAS3_01720 (rpoA)
03400 DNA repair and recombination proteins [BR:
rhok03400
]
RKAS3_01720 (rpoA)
Enzymes [BR:
rhok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RKAS3_01720 (rpoA)
Transcription machinery [BR:
rhok03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RKAS3_01720 (rpoA)
DNA repair and recombination proteins [BR:
rhok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RKAS3_01720 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Ribosomal_TL5_C
HHH_5
bMG10
Motif
Other DBs
NCBI-ProteinID:
BDS48595
LinkDB
All DBs
Position
167950..168942
Genome browser
AA seq
330 aa
AA seq
DB search
MLIAQRPTLHEEVLAPNRSRFALEPLEPGFGYTLGNSLRRTLLSSIPGAAVTNIRIEGVR
HEFSTIEGVKEDVTEIILNIKDLVVSSEHDAPVVAHLRKQTAGVVTAADIQVPAGVEVHN
PELVIATINAKAKFEVELTIERGRGYVQASQNRNPDADAGVIPIDSIYSPVLKVSYRVEA
TRAGEFTNFDKLIVDVETKPSITPRDAVASAGSTLVELFGLARELNVAAEGIEIGPAPVE
AGLSPELAMPIEDLDLTVRSYNCLKREGINTVSELIGLSEDQLMNIRNFGSKSVDEVRDK
LTSMGLKFKDAVPGFDAAYFSSAYDEDDQA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgctgattgcacagcgtccaactcttcacgaagaagtactagcaccaaaccgttcacgt
tttgctctagagcctctagagcctggcttcggttacaccctaggaaactcactccgccgt
accctactttcatcaatcccaggtgcagctgttaccaacatccgcattgagggtgttcgt
cacgagttcagcaccatcgaaggcgttaaagaagacgtcaccgagatcatcttgaacatc
aaggacctcgtagtttcttcagagcacgacgcacctgttgttgctcacctacgcaagcag
accgctggcgttgtaaccgctgctgacatccaggttcctgctggtgttgaggttcacaac
cctgagttggtaattgcaaccatcaacgcaaaggcaaagttcgaagttgagctaaccatc
gagcgtggccgtggctacgttcaggcttctcagaaccgcaacccagatgcagatgccggt
gtaattccaatcgactcgatctattcaccagttctaaaggtttcttaccgcgttgaggca
actcgtgccggtgagttcactaacttcgacaagctgattgttgatgttgagaccaagcca
tcaatcactcctcgcgatgctgttgcatctgccggaagcactttggttgagttgttcggt
cttgcgcgcgagctaaacgttgcagcagaaggtatcgagatcggcccagcaccagttgag
gccggcctttcaccagagcttgcaatgcctatcgaagacctggacctaaccgtccgttca
tacaactgcctaaagcgtgagggcatcaacaccgttagcgagctaatcggtctgtcagaa
gaccagttgatgaacatccgcaacttcggtagcaagtcggtagatgaggttcgcgacaag
ctaacctcaatgggactaaagttcaaggacgccgtcccaggcttcgacgcagcttacttc
agctcggcttacgacgaggacgaccaggcgtaa
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