Rhodoluna sp. KAS3: RKAS3_03460
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Entry
RKAS3_03460 CDS
T09960
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhok
Rhodoluna sp. KAS3
Pathway
rhok03420
Nucleotide excision repair
rhok03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RKAS3_03460
03430 Mismatch repair
RKAS3_03460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhok03400
]
RKAS3_03460
Enzymes [BR:
rhok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RKAS3_03460
DNA repair and recombination proteins [BR:
rhok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RKAS3_03460
MMR (mismatch excision repair)
Other MMR factors
RKAS3_03460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
DUF2800
DEAD
Motif
Other DBs
NCBI-ProteinID:
BDS48769
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All DBs
Position
337169..340324
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AA seq
1051 aa
AA seq
DB search
MADFKFSANQVYAVIRPYTLTPEQAAAVEGASVNSPALVVAGAGSGKTELMAVRVLWLVA
NRVVRPEQVLGLTFTRKAAAELGKRIYESLLKLRDTDMWPEDLEYDFIAPTISTYNAYAN
NLFRENALALGYESDAILLTEAAAFQLAREVILKHGSEIDLRLSDLDASLKSIVESVLAL
AQSMNDNLVGADQIEAVIEAAASSLAELPRKAGSSDTTPYSYMQSLLQPIMGTPTIAKLA
EAYAREKQLQGYVDYSDQVALAERAVREVPGIIELEQSKFQQVLLDEYQDTSYLQTRLLQ
GLFAGTSVFAVGDPNQSIYGWRGASASNLKNFYRDFNAPDGSAWFSLSTSWRNPQQVLNL
ANHLIGELKVVELTPAPSAGLGQVEVDFQPDLKAEAQAVARWLKQNSNQDQTSALLMRKR
SQMHLFVEALEGQGLDVEVVGLGGLLQMPEIVDLVSALKVIHNPLAGTQLIRLLSGPRWR
LGAKDLERLHRYATRRARLDDSLVERQREGLAPEDAVSIVDALDLLLNEREPEKIGFSDL
GLPRLLDAAALLRNLRRQTGLSLPEYVRAVEQELWLDIEVAANPRRHNPLAHLNAFSNIV
SSYSANNHQPHLGGFIEWLDFADQRERFEVPTKNPEAGVVQVLTIHAAKGLEWDNVVVAN
LVEGDFPGDGKGSSGWLAFGQLPYPLRGDRNELPEWNYAQVETQPDAKSLVENFKELMRQ
HQLKEELRLMYVAVTRPKSRLLLTGSYWKPGNKKVREPSRFLKQVTEISGTSLPENQHPD
NPLEDHAMVEAWPLDPLGERHRLVLERAEKLTREAIEVIESNQAQAAMQVQSDIDLLLGE
RDAALASADRVEVPIRIPASRFKDYILDFDGLAQRLKRPMPSRPFQQTRNGTYFHTWVEG
QFNLATLGESETSVDAIDSDFASESLETLKENFASSRWATLTPIAIEQEIQLTMAGHTFV
CKLDAVFATESGVEIVDWKTGKAPKDQADLEAKTLQLALYRIAYSRFTGLPIEQISVGFY
FVADNVEIRPEKVLDEAELLELWDRATSQKP
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
gtggctgattttaagttctctgcaaatcaggtctacgcggtaatccgcccctacacgctc
accccagagcaggcggctgccgtcgagggagccagcgtcaactctcctgcgctcgtggtt
gccggtgctggttccggaaaaaccgagctcatggcggttcgggtgctttggttggtagcc
aatcgggttgtgcggccagaacaggtgctagggcttactttcacgagaaaagctgccgcc
gaactcggtaaaagaatctacgaaagcctgttgaaactgcgcgacaccgatatgtggcca
gaggatctcgagtacgacttcattgccccaacaatttcgacctacaacgcgtacgcgaat
aatttgtttcgtgagaacgctttagcgctcgggtatgaatcagacgccatactgctcacc
gaagctgcagcattccaacttgcccgtgaagtcatcctgaagcacgggtccgaaattgac
cttcgcctgagtgatctcgacgccagcctgaaatcgattgtggaatcggtcttagcccta
gcgcaatccatgaacgacaacctcgtcggcgcagatcaaattgaggcggtaatcgaagcc
gcagcctcctcgctagccgaactgccccgaaaagccggttcatccgacaccacgccatat
tcgtacatgcagtctttgctccagccaatcatgggcaccccgaccatcgccaagttggca
gaagcctatgctcgcgagaagcagctccagggttacgttgattactccgatcaagttgcc
ttggcagaacgtgcggttcgcgaggtccccggaatcatcgaactcgagcagagtaagttt
cagcaggttctccttgatgagtatcaagacacctcctatcttcaaaccaggctcctgcaa
gggttgtttgctggcacatcggtgtttgcagttggcgacccaaaccaatcaatttatggc
tggcgtggggccagtgcctccaacctcaaaaacttctaccgagacttcaatgcaccggat
ggatcggcctggttctcgctgtcgacttcctggcgcaatccccagcaagttttgaacctt
gctaaccacctgattggtgaactcaaggtcgttgaactcacgccggctccaagcgcaggc
ctcggtcaagtggaggtcgattttcagccagacctcaaggctgaggcacaagctgttgcc
cgttggctgaagcaaaatagcaatcaggatcaaacctcagcgctgctgatgcgcaaaaga
agccaaatgcacctgtttgttgaagcgctggaaggtcaggggcttgacgtcgaagttgtg
ggccttggcggtctgcttcaaatgccagagatcgtcgacctagtttccgcgctaaaagtt
atccataatccgctcgccggcactcagttgatccgtctgctgtctgggccccgatggagg
ctcggcgcaaaggatcttgagcgcctccaccgttacgccacgagacgtgcgcgacttgat
gattctttggttgagcgccagcgggagggtctagcgccggaggacgcagtgtcaattgtt
gacgctcttgatcttcttctaaatgagagagaaccggagaaaatcgggttctcagacctt
ggattaccaagacttctcgacgccgctgcgttactcagaaaccttcgccgccagactggg
ctctccttaccggaatacgtgagagcagttgagcaggagttgtggcttgatattgaggtt
gcagccaaccctcgcaggcacaacccgctggcccacctaaacgccttctcaaatattgtt
tcgagctattccgccaacaaccatcagcctcaccttggcggattcattgaatggctagat
tttgccgatcagcgggaacgttttgaagtacccaccaaaaaccctgaggccggtgtcgtg
caggttcttaccatccacgcagccaaagggttggagtgggacaacgttgtggttgccaat
ctggttgaaggtgactttccaggagatggcaagggctcttcgggctggctggcatttggg
caacttccgtatccgttgcgcggagatcgcaacgagcttccggagtggaactacgcacaa
gttgaaacccaacctgatgccaaaagtttggttgagaatttcaaggagttgatgcgtcag
caccagttgaaagaagaacttcggcttatgtacgttgccgtaacgaggccaaaatcaagg
cttctgctcaccggctcatactggaaacccggaaacaagaaggttcgagagccatcccgt
tttctgaagcaggtaaccgagatttccggaacttctttgcctgaaaatcagcacccagac
aatccccttgaagatcacgccatggttgaggcctggccgcttgatccactcggagaaaga
caccgtttggtgctcgagcgagccgagaagctgactcgtgaggctatcgaggtaattgaa
agcaatcaggcacaggcagctatgcaggtgcagagcgacatcgacctactgctcggtgaa
cgtgatgcggctcttgcgagcgccgaccgagttgaggttccaatcagaatcccagcctcg
aggttcaaagattacattcttgacttcgacggtctggctcagcgactcaagcgcccaatg
ccatcccgcccctttcagcaaactcgaaatggcacctactttcacacctgggtagagggg
caattcaatttggcaacgttgggcgaatccgaaacgtctgttgatgcaattgatagcgac
tttgccagcgagtcgctcgaaacgctaaaggaaaattttgcttcatcgcgttgggcaact
ctcacaccgattgcaattgagcaagaaattcaattgacaatggccggccacacatttgtt
tgcaagcttgacgcagtatttgcgacagaatccggagttgaaattgtcgactggaaaacc
ggaaaagctccaaaagatcaggccgatttagaagccaaaactctgcagctggcgctctat
cgaatcgcgtattcgagattcaccggtctgccgatcgagcagatttctgttggtttttac
tttgtggcagacaacgtcgagattcgtccagaaaaggtgcttgacgaagcggaactgctt
gaactttgggaccgggcaactagccagaagccttag
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