Rhodoluna sp. KAS3: RKAS3_04960
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Entry
RKAS3_04960 CDS
T09960
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rhok
Rhodoluna sp. KAS3
Pathway
rhok00470
D-Amino acid metabolism
rhok00550
Peptidoglycan biosynthesis
rhok01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhok00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RKAS3_04960 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RKAS3_04960 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhok01011
]
RKAS3_04960 (murD)
Enzymes [BR:
rhok01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RKAS3_04960 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rhok01011
]
Precursor biosynthesis
Amino acid ligase
RKAS3_04960 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
TrkA_N
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
BDS48919
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All DBs
Position
498505..499914
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AA seq
469 aa
AA seq
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MVFGLGVTGFSVADTLAELGCQVLVVAEKADPELVDILDVIGVTHITGEAAKGLPQQVID
FRPQLVVTSPGVRPEHDLLGWSAEQSIPIWVDIDLAWRVRDKTTRVADWLVVTGTNGKTT
TVQMVEAMLNRGGKKAIACGNIGTPILDAIRDPEGFDALIVELSSFQLHYLGEIHPYSSA
VLNLADDHLDWHGSFEAYRDAKAKVYENTAVACVYNTADLATEKMVENADVHEGARAIGF
TTGTPGRSQVGFVEDILCDRAFLDDRANSALEIATLDDLSKIGVLTPHLMANAAAAVAMA
RSYGIDPADVRAALLDFRLDAHRIELVAEQDGIRWIDDSKATNPHAAAASLNSFEKVIWV
VGGLLKGVDLNDLVKKFADRLSAAIVIGVDRSHVVEVLSAQIPNLPVFEISAADNTDVMP
QVVEAASKFTEAGSVVLLAPAAASMDQFKDYADRGNQFAEAVRAHLETA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtggttttcggtctcggtgtcaccggtttttcagtagctgacacccttgccgaattgggt
tgtcaggttttggttgtggccgaaaaagctgatccagagctggtcgatattctcgatgta
attggtgttactcacatcaccggtgaagccgccaaagggcttccacaacaggtcattgat
ttcagacctcaattagttgttacttcgcctggcgttcgcccagaacatgacctcctcggt
tggtcggccgagcaaagcattcctatttgggtagacattgatcttgcatggcgtgtgcgc
gataaaaccacacgtgtggccgattggttagtggtcactggcaccaacggtaaaaccacc
accgtccagatggtcgaagcgatgctgaaccggggtggaaaaaaggcgattgcctgcgga
aatatcggaacaccgatcctcgatgccatccgtgacccagagggctttgacgctctcatc
gttgaattatcgagttttcaattgcactacttgggcgaaatccacccgtattcaagtgcc
gttctgaacttggctgacgatcatctcgactggcacggctcattcgaggcctatcgagat
gccaaggccaaggtttacgagaacactgcggttgcttgtgtttacaacacagccgacttg
gctactgaaaaaatggtagaaaacgctgatgttcacgagggcgcccgagcaattggtttc
acgaccggaacaccgggccgcagtcaggttgggtttgtcgaagacatcctgtgtgaccgc
gctttccttgatgaccgagccaattctgcactcgaaattgccacgctggacgacctgtca
aaaatcggtgtgctaaccccacacctgatggcaaatgccgctgccgctgtggccatggcg
cgttcttacggaatagatccggcagatgttagagcggcgctactcgactttcgacttgac
gcccaccgcatcgagctagttgccgaacaggatggcattcgctggatcgatgattccaag
gccacaaacccgcacgcagctgctgcttcattgaactcattcgagaaggtcatctgggta
gtgggtggcttgctaaagggcgttgacctcaacgatttagtcaagaaatttgcggaccgg
ttgagcgctgccattgtgattggtgttgaccgctcgcacgtcgttgaggtactttcggcc
cagattccaaacctgccggtgtttgaaattagcgctgcagacaacaccgatgtaatgccg
caggttgttgaggctgcaagcaaattcaccgaagccggttcggtggtgctgctggcccca
gcggcggcatcgatggaccagttcaaagactatgccgaccgcggaaatcaattcgccgaa
gctgtacgagcgcacttggagacagcatga
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