Rhodoluna sp. KAS3: RKAS3_05870
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Entry
RKAS3_05870 CDS
T09960
Symbol
polA
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rhok
Rhodoluna sp. KAS3
Pathway
rhok03030
DNA replication
rhok03410
Base excision repair
rhok03420
Nucleotide excision repair
rhok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RKAS3_05870 (polA)
03410 Base excision repair
RKAS3_05870 (polA)
03420 Nucleotide excision repair
RKAS3_05870 (polA)
03440 Homologous recombination
RKAS3_05870 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhok03032
]
RKAS3_05870 (polA)
03400 DNA repair and recombination proteins [BR:
rhok03400
]
RKAS3_05870 (polA)
Enzymes [BR:
rhok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RKAS3_05870 (polA)
DNA replication proteins [BR:
rhok03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RKAS3_05870 (polA)
DNA repair and recombination proteins [BR:
rhok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RKAS3_05870 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RKAS3_05870 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
IMS_HHH
HHH_5
NYN_YacP
N1_PEX6
HHH
Motif
Other DBs
NCBI-ProteinID:
BDS49010
LinkDB
All DBs
Position
complement(596421..599138)
Genome browser
AA seq
905 aa
AA seq
DB search
MNANPKPTLLLIDGHSLAFRAFYALSPDSFKTSDGQHTNAVHGFISMLLNILQAEKPTHL
AVAFDLSRSSFRTEEYPEYKGTRGETPPEFVGQTELLQEALAAMNIRTITRPNFEADDII
ASLADQSADKGFDVYVVSGDRDTFQLISDRTTILYPVKGVLNLARMDDAAVLEKYGIHAK
QYPDLAALVGETSDNLPGIPGVGPKTAAKWLQQHGDLNGVLAAAEQITGKVGESLREHRE
LAVRNRRLNHLVRDLDFDFTQDDLSLGAVDEDQVRAVFAKLQFKSLTERVLKLRGANGSQ
TSDGSKSEAAGTSSAVSAFNESFATPTAVFDEVSVPEVSVVGSDELTAWLKEQHGTIGVA
FEFANDAVSSVGFATEALRKLWAPTSSEELQNVLGGWLADSTVAKALHGAKDVNKRLLDL
GLTASSVDYDPLLMAYLLNPVGKNFSLDELALEYLGMVVKRSDPNQLIADEATDVSLDAF
LTSMLSPKLFKLLEEQNQLRVYAEVELPTVRSLAQMEHLGVAVDQAKLQALFERLSAEVA
EIAKQAYAIIGREVNLASPKQLQTILFDELGMTGTKQVKTGFSTNAAALNELFEQTQHPF
LERLLEHREVTKIRQIVETMLKAIGADGRIHTNYVQTGTSTGRLSSENPNLQNIPIKSER
GREIRDAFVVGTGFETLLTADYSQIEMRIMAHLSEDEGIIEAFKTGEDLHRFVGARIFGV
APSEVTSAMRSKVKAMSYGLVYGLSEYGLAKQLRIPNAEAKQLMADYFARFGGVRRYLAS
VVDEAKTLGYTATTFGRRRPFEDLNSKLFQVRENARRAALNAPIQGTAADIMKLAMNQIS
ESLATEGFASRMLLQVHDELVFEVAAGELEKLKAMVTDKMANVVELSVPLEVQIGIGKSW
DQAGH
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctaatccaaagcctaccctcctgctaatcgacgggcattcactggcatttcgt
gctttttacgcactaagcccagatagcttcaagacttcggatgggcagcacaccaacgcc
gttcacggctttatttcgatgctgctaaacattctgcaggcagagaaaccaacccacttg
gctgttgcgttcgacctttccagaagttcattccgaaccgaggagtatcccgagtacaag
ggcacccgcggagaaaccccgccggagtttgtcgggcaaactgagctgcttcaagaagca
ctggccgcgatgaacatccggaccatcactcgtccgaattttgaggctgacgatatcatc
gctagcctcgccgatcaaagtgccgataagggcttcgatgtttacgtggtttctggtgat
cgcgatactttccaactaatcagcgatcgcaccacaattttgtatccggtaaagggcgtg
ctgaatctggccagaatggacgacgctgcggttctagaaaagtacggaattcacgccaag
caatacccagatctagcagcactcgttggagagacctccgataacctgccgggcattccg
ggcgtaggcccaaagaccgcggccaagtggctgcagcaacacggagacctcaacggtgta
ctagccgctgctgagcaaattactggaaaggtgggcgagagccttcgagagcaccgagaa
cttgcggtccgcaatcgccgcttgaaccatctggtccgcgacctagactttgacttcacc
caggatgacctgagccttggtgcggtagacgaggaccaggttcgcgcagtatttgccaag
ctgcagttcaagtcactcaccgagcgagttctcaaactccgtggagccaatggttcacag
accagcgatgggtcgaagtccgaggcagccggaacatcttctgcagtaagcgccttcaac
gagtcttttgccaccccaacagctgttttcgatgaggtatcagtgccggaggtttcagtg
gttggctctgatgagctgactgcttggttaaaagagcagcacggcaccatcggggtggcc
tttgaatttgccaacgatgccgtgagcagtgttggttttgcaaccgaggcgctcagaaaa
ctttgggccccaaccagctctgaagagttgcagaacgtgctcggcggttggcttgccgac
tcaaccgtggccaaggcgctgcacggcgctaaggacgtcaataaacgcctgctggacctt
ggactgactgcgagcagcgtggactatgacccgctcctgatggcatatctgctgaacccg
gtaggtaagaatttcagccttgacgaactggctcttgagtatctgggaatggtggttaag
cgctcggacccaaatcagttgatcgccgacgaggccaccgatgtgtccctcgatgcattt
ttgactagcatgctcagcccaaaactgttcaaactgctcgaggagcagaatcagctcagg
gtctatgccgaagttgagctacctacggttcggtcgctggcccaaatggaacatctgggt
gttgcagtagatcaggccaaactgcaggcgctgtttgaacgcctgtccgcagaggtggcc
gagattgccaagcaggcctacgccattatcgggcgtgaggttaacctggcctcgcccaag
caattgcagacaattttgtttgatgaactgggaatgaccggcaccaagcaggtcaaaact
ggattctcgacaaacgcagccgcactgaacgaattgtttgaacagacccaacacccgttt
ctcgagcgattgctcgaacaccgcgaagtcaccaagatccgtcaaattgtagaaaccatg
ctgaaggcaatcggggcagacggtcgcattcacacaaattacgtgcagactggcacctcg
accgggcgtctttcctcagaaaacccaaatctccagaacatcccgattaagagtgagcgc
ggtcgagagattcgcgatgcgtttgtggttggcacgggttttgagaccctgttgactgct
gactactcgcagatcgaaatgcgaatcatggctcacctgtcagaggatgagggcattatc
gaagccttcaaaactggtgaagacctacacagatttgtcggtgcgcgtattttcggcgtt
gcgccaagcgaggttacctcggcgatgcgctcgaaggtaaaggctatgagctacggcttg
gtctacggactcagcgagtacggactggctaagcagttgcgcattccgaacgccgaggcc
aagcaattgatggccgactactttgcccgattcgggggagtgcggcggtacctagcctct
gtggttgatgaagcaaaaaccctcggatacacggcgactacctttggtcgtcgtcgccct
ttcgaagacctaaacagcaagctcttccaggtacgtgaaaacgcacgacgagccgccctg
aacgcaccgatccagggaaccgcggcagacatcatgaaactggccatgaaccagatctct
gagtcgctggcgactgaaggctttgcgagccgcatgcttttgcaagtccatgacgaattg
gtctttgaagtggcagccggagagctagaaaaactcaaggccatggttaccgacaaaatg
gctaatgttgtcgaactttcggtgccgctagaagttcaaattggtatcggaaagagctgg
gatcaagctggccactag
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