Rhodoluna sp. KAS3: RKAS3_06660
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Entry
RKAS3_06660 CDS
T09960
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rhok
Rhodoluna sp. KAS3
Brite
KEGG Orthology (KO) [BR:
rhok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhok03032
]
RKAS3_06660
03400 DNA repair and recombination proteins [BR:
rhok03400
]
RKAS3_06660
Enzymes [BR:
rhok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RKAS3_06660
DNA replication proteins [BR:
rhok03032
]
Prokaryotic type
DNA Topoisomerases
RKAS3_06660
DNA repair and recombination proteins [BR:
rhok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RKAS3_06660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
DUF1192
Motif
Other DBs
NCBI-ProteinID:
BDS49089
LinkDB
All DBs
Position
680818..683235
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AA seq
805 aa
AA seq
DB search
MTLEHLPEERIVDIDLSQEMQDSFLEYSYSVIYARALPDARDGLKPVHRRIIFQMGEMGL
RPDRGHVKSARVVGEVMGKLHPHGDSAIYDALVRMAQPFSLRVPMIDGHGNFGSLDDGPA
AARYTEARLSTASLLMNEGLDEDVVDFKPNYDAQLTEPDVLPAAFPNLLVNGASGIAVGM
ATNMPPHNLREVIAGARFLLETPQATTEDLMQYVPGPDLPNGGIIMGLEGVKDAYETGRG
VFKTRARVSIESVSPRKMGIVVTELPYLVGPEKVIEKIKDGVNAKKLQGIADVTDLTDRT
NGLKLVIELKTGFDPQVVLDLLYRFTPMEDSFGINNVALVDGRPQTLGLRDMLGVYLAHR
ITVTRRRTKNRLGKRQARLHLLEGLLVAIDSIDEVIAIIRNSDEVDEARQALRTRFALSE
IQAEYILELRLRRLTKFSKIELETERANLLDEIARLESILASDQNLRAVVSAELAEIADK
YGDERRTTLISDVTEVKPISLAKAASVSAELADAPCTIVVSSSGRVARVEGHEVSLPSGK
RQSHDAIRTLISTSTRSDIGFLTSDGLVHRIHVGDVPNISDASLMGSAVQADSFLGLTKG
VRFVSVFGLEDGISIALGTKQGVVKRVLSDYPAKDEFEMISLKPGDEVIGAAVCSDGATL
VFVTSDAQLLHFSASVVRPQGRPAGGMAGINLSPDSAVIDFEVIDEVENASVITAANSSL
AIPGTDAGSIKMSSFSEFPGKGRATGGVRAQRFIRGEDQLYFAAVVSGEPKALTPDGKPL
ALNLDLAKRDASGNPLPAVVGSIGI
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaccctggaacacctgcctgaggaacgcattgttgacattgatttgtcgcaagaaatg
caagattcttttctcgagtactcctactcggtcatctatgcgcgagcacttcctgacgcc
cgtgatggcctgaagccggttcaccgaagaatcatcttccagatgggcgagatgggtctc
aggccagatcgcggtcacgtgaaatctgctcgcgttgtcggcgaggttatgggcaaactc
cacccgcacggtgacagcgctatctacgacgccctggtgcgtatggcgcaaccattttcg
cttcgcgttccgatgattgatgggcacggaaactttggaagcctagatgacgggcctgct
gctgccaggtatacagaagccaggctgtctaccgcatcactactgatgaacgaaggcctc
gacgaggacgtagttgacttcaaaccaaactacgatgcacaactcactgaacccgacgtg
ttgcctgcggccttcccaaatctcttggttaacggcgcctcgggaattgctgttggtatg
gcaaccaatatgccgccccacaatttgcgcgaggttattgctggcgcgcggttcttgctt
gaaactccgcaggcaaccactgaagacctgatgcagtatgttcctggccctgatcttccg
aatggtggaatcatcatgggtctcgaaggcgtgaaagatgcatacgagactggacgtggg
gttttcaaaacccgtgcccgagtttcgattgagagtgtgtcccctcgaaaaatgggcatc
gtggttaccgagttgccatatctagtcggcccagaaaaggtaatcgagaagatcaaggat
ggcgttaacgccaagaaactgcagggcattgcagatgtaaccgatctaaccgacagaact
aatggcctaaagctcgttatcgagttgaagaccggttttgaccctcaagttgttctcgat
cttctataccgattcaccccgatggaagactccttcggtatcaacaacgttgctttggtt
gacggcagaccacagaccttggggctgcgggacatgttgggcgtttatttagcgcaccgc
ataacagtaaccaggcgcagaaccaagaatcgcctaggtaagagacaagcccgtctgcac
ctgcttgaaggtctccttgtcgcaattgactccatcgacgaggtcattgcaataattagg
aacagcgacgaagttgatgaagcccggcaggcacttcgcacccgatttgctctctcggaa
atccaggccgagtacattctcgaactgcgccttcgtcgcttgactaagttttccaagatt
gaactcgaaaccgagcgggcgaatctgttagacgaaattgctcgtctggaatcgattctg
gcttcagaccagaacctccgagctgtggtttctgcagagttagcagagatcgccgataag
tacggcgatgagcgtcgaacgactttgatcagcgatgtaaccgaagtcaagccaatttca
ctggccaaagctgcgtccgtgagcgccgagctggccgacgcgccttgcacgattgtggtc
agttcctccggtcgtgttgctcgcgtcgaaggacacgaagtgtcgcttccgagcggtaag
cgccagagccacgatgccatccgaaccctgattagtacatcaacacgctctgacatcgga
ttcctaacgagtgatggtctggtacatcgaattcacgttggtgatgtgcctaacatttca
gacgcaagtttgatgggaagtgcagttcaagctgatagcttccttggcctaaccaagggc
gttcgattcgtatcagtgtttggacttgaagatggcatctccatcgcactaggcaccaag
cagggagtcgtaaaacgcgttctctcggattaccccgccaaggacgagtttgaaatgatc
tctctaaaaccaggcgatgaggtaatcggtgctgcggtgtgttcggacggcgcaaccctt
gtttttgtgaccagcgatgcccaactgctgcatttcagtgcttccgtggttagacctcaa
gggcgtccggccggcggaatggcaggtatcaacctttcgccggattccgctgtgattgat
tttgaggttatcgacgaagttgaaaatgcttcagtaattactgctgcgaatagctcactg
gccataccgggcactgatgcgggaagcataaagatgtcttcgtttagcgagttccctgga
aagggtcgagccaccggtggcgtgcgggcgcagcgattcatccgcggtgaggatcagttg
tacttcgctgcggtggtctcgggcgaaccaaaggcgctaactcctgacggaaaacctctt
gctctgaatctggatcttgccaagcgtgacgcttcgggaaacccgcttccggccgttgtt
ggttcgataggaatctag
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