Rhodoluna sp. KAS3: RKAS3_08420
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Entry
RKAS3_08420 CDS
T09960
Symbol
smc
Name
(GenBank) chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
rhok
Rhodoluna sp. KAS3
Brite
KEGG Orthology (KO) [BR:
rhok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rhok03036
]
RKAS3_08420 (smc)
Chromosome and associated proteins [BR:
rhok03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
RKAS3_08420 (smc)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
DUF8214
Motif
Other DBs
NCBI-ProteinID:
BDS49265
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All DBs
Position
complement(870062..873580)
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AA seq
1172 aa
AA seq
DB search
MYLKSLTLKGFKSFAQPTTFAFEPGVTAVVGPNGSGKSNVVDALAWVMGEQGAKSLRGGK
MEDVIFAGTSTKGPLGRAEVILTIDNSDGALPIDYTEVTISRTLFRNGGSEYAINGEPVR
LLDVQELLSDSGLGREMHVIVGQGQLDSVLRATPEERRGFIEEAAGILKHRRRKEKTQRK
LEAMQANLTRLNDLAGEVRRQLKPLGQQAEVAREAQGIAAVVRDAKARILAADITELHRA
LEETAKSESDRRGERNILQELLSENTARLAQLEAAQVSTELDQARNLAYQFDSLAERLRS
LLSIATQKVALLGSQAEVSGAQVDPASIEAEALAAEATAVELAQSVEALQKALHEAEKSR
SEARDVLEKFDNEVAEANALISKFDLDKARLANEANIAESRLASLMGEVVRHQQALAEAN
ERLEARKAEYQNLESQLQNQQSPADNGLELRYEAAQKAVSESQARIEALRDEIHVAERER
DSLAAKRSALNLTLEQKDGTTELTAAGLRGIRGLVASHMKIQKGFEVAVAAALGSLADAL
VADSRDEGLSAIEHLKKSQGGRVELIIADVDGGKNSPDVPKLAGSRAASEVVEAPQGILN
LLAGVVIVDSIDAARALYASDANANKFTLITLEGDVLSDNIIRGGSSNKPSKVELVAQRD
AAEKRLAEVTDLVEKGRAELAQARSTEEAAKQSSKDALAALNEHDAALATNAERLGRLRV
QVEASEAEVARLGRVAEQAALGIGEAERQLNQAIVDHDEFAARERPTLDLANRQTLAENL
EQERQRELELRVDLGAAVERVRVETERGRNLRSQVREAQVAIEKSKAAAAAQKAQLDSAQ
RVLDALPIVMEAVAESATQARVRLHELETARANQNAELVKLRGETAEIQMKLAALTQNVH
DMELANHEKRLNLSNLVSRANDELGMEQSILLAEYNPELPIPDETADGGFKAFNRDEQSR
RLREAERLFEKLGRVNPLALEEFAALEARHKFLTEQLADLTQTRKDLMQIIEDLDAKMQV
IFADAFEDTRKAFEQVFPTLFPGGTGSIFLTNPDDMLTTGLEVTVKPAGKRIERLSLLSG
GERSLAAVALMVAIFKARPSPFYVMDEVEAALDDANLGRLLQIFEDLRSNSQLIIITHQK
RTMEIADALYGVSMRQDGVSAVVGQRLLEKSK
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
ttgtacttaaagagcctcaccctcaagggatttaaatcattcgcacagccaaccacattt
gcttttgagccaggcgtaaccgccgtagttgggccaaatggttccggtaaatccaacgta
gttgacgcgcttgcctgggtgatgggtgagcagggcgccaagagcctccgcggcggcaag
atggaagacgtaatctttgctggcaccagcaccaaaggtccccttggtcgagccgaagta
attttgaccatcgataactccgatggcgctctaccaattgactacaccgaagtaaccatt
tcgagaaccttgttccgcaacggcggtagcgagtacgcgatcaacggcgagccggtcagg
ttgttggacgtccaagaactcctgagcgactcaggtctcggtcgcgagatgcacgttatc
gtcgggcaaggtcagctggattcggttcttcgtgccacgccagaagaacgccgcggattc
atcgaagaagctgctggaattttgaagcaccgccgccgcaaagaaaagactcagcgcaag
cttgaggcgatgcaggccaacctaaccagacttaatgacctagctggcgaggtgcgcagg
cagctaaagccgcttggccaacaggcagaagttgcccgcgaagcgcagggcatcgctgcc
gttgtccgagatgcaaaagcccgtattttggctgcagacatcacagagctccaccgagca
ctcgaggaaaccgccaagagtgagtcggatcgacgtggtgagcgcaacatcctgcaggaa
ttgctctcagaaaatacagctcgcttggctcagctggaggcagcccaagtatctaccgaa
ctcgaccaggctcgcaatttggcttaccagttcgactcgctggcggagcgtctccggtct
ctgctctctatcgcaactcaaaaggttgctcttttgggctcgcaggctgaggtctctggt
gcgcaggtcgacccagcatctattgaagccgaggcacttgccgcagaagcaacagcagtc
gaattagcgcaatcggtcgaggccctgcaaaaagcactccacgaggctgaaaagtctaga
agtgaagcgcgcgatgttctggaaaagtttgacaacgaagttgccgaggccaacgcgctg
atctcgaagtttgacctagacaaggccaggctggccaatgaggcaaacatcgcagaatcg
cggcttgccagcctcatgggagaggttgttcgtcaccaacaggcgctcgccgaagccaat
gagcgcttggaagcacgtaaagccgagtaccaaaatctcgaaagtcagctgcaaaaccag
cagtcaccggcagacaacggtctcgaacttaggtacgaagcggcccaaaaggcggtctcg
gaatcgcaggctcgcattgaagcacttcgggatgaaatccatgttgccgagcgtgagcgt
gactcgcttgcggcaaaacgctccgccctgaacttaacgctggagcaaaaagacggtaca
accgagctgaccgctgcgggattgcgcggtatccgtgggctagtagcaagccacatgaag
attcaaaaagggtttgaagtcgctgttgctgcggcactcggttcactggctgacgccttg
gttgctgattctcgcgacgaaggtctttcggccatcgagcacctcaagaaatctcagggt
ggccgcgttgagttgattattgctgacgtggatggtggcaaaaacagccctgacgtgcca
aaacttgccggctcgcgcgccgcctcagaagttgtcgaggccccgcaaggcatactaaac
ctgcttgccggtgtggtcatagttgacagcatcgatgcagccagggccttgtatgcctcg
gacgccaacgccaacaagttcactcttatcactctcgagggtgacgtcctctcggacaac
atcatccgtggtgggtcttctaataagccttcaaaagttgagcttgttgctcaacgcgat
gcagctgaaaagcgtttggctgaggttaccgatctagttgaaaagggccgtgctgaactt
gctcaggcgcgttcgactgaagaggcagccaagcaaagctccaaagatgcactggcagcc
ctgaatgagcacgatgcagccctagccaccaatgctgagcgcctaggccgtttgcgagtt
caggttgaggcttcagaagccgaagttgccagacttggccgggttgctgaacaggcagcg
ctcggaattggcgaagctgaacgtcagctaaaccaagcaatcgtcgatcatgatgaattt
gcagcgcgcgagcgaccaactctagatttggcaaaccgccagaccctggctgaaaacttg
gagcaggagcgccagcgcgaactcgagttgcgggtggatttgggcgcggccgttgagcga
gttcgggtcgagactgagcggggtcgtaaccttcgatcgcaggtacgtgaagctcaagtt
gccatcgaaaagtcaaaggcggctgcagctgcacaaaaggcacagcttgactcagcccag
cgagttttggacgctctaccgattgtcatggaagcagtggctgagagcgcaacccaggcg
agagtacgactgcacgagctggaaactgcccgcgccaatcaaaacgccgaactagttaag
ctgcgcggagagactgccgagattcagatgaaactcgcagcgctcacccaaaatgttcac
gacatggaattggcaaaccatgaaaagcgtctaaacctatcgaacctagtttcgcgagcc
aacgatgaactcggtatggagcagtcgattctgcttgctgaatacaatccagagttgccg
attccagacgaaacagccgatggtgggttcaaggcctttaaccgcgatgagcagtcaagg
cgtctgcgcgaggccgagcgactatttgaaaaattgggtcgagtaaacccgctagctctt
gaagaatttgcagctcttgaagcaagacataagttcctcaccgaacagttggcagaccta
acccagactcgtaaagacttgatgcagatcatcgaagacctggatgcaaaaatgcaggtg
atttttgctgacgcttttgaagacacccgcaaggccttcgagcaggtgttcccaacgctg
ttcccaggcggaactggctcgattttcttgaccaacccagatgacatgctcaccactggc
ttggaagttacagtcaagccagccggaaagcgtattgagcgcctgtctttgttgtctggt
ggtgagcgttcattggctgctgtggctctcatggtggcaattttcaaagcgcgcccttcg
ccgttctacgtcatggacgaagttgaagctgcgctggacgatgccaaccttggccggttg
cttcaaattttcgaagacctgcgctccaactcgcagttgatcatcattacgcaccaaaag
cgaaccatggaaattgccgatgcgctttatggagtctcgatgcgccaagacggcgtttct
gccgtggtcggtcaacgtctgctagagaagagcaaataa
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