Rhodoluna sp. KAS3: RKAS3_08850
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Entry
RKAS3_08850 CDS
T09960
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhok
Rhodoluna sp. KAS3
Pathway
rhok03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RKAS3_08850 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhok03400
]
RKAS3_08850 (ung)
Enzymes [BR:
rhok01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RKAS3_08850 (ung)
DNA repair and recombination proteins [BR:
rhok03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RKAS3_08850 (ung)
Prokaryotic type
RKAS3_08850 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BDS49308
LinkDB
All DBs
Position
complement(914208..914864)
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AA seq
218 aa
AA seq
DB search
MFFEQMHPTWQQALATSKPLLDELELKVAARETEMVPAMAQVMKAFEMPLDQVRVLIVGQ
DPYPTAGHAIGLSFAVAKDVKPLPRSLKNMMIELKDDLGKGVSSEGDLTRWVQQGVFLLN
RHLTTDLSEPGAHSNLGWAQFTDRVVAVLNRQVGRNLVAILWGNQAQELKGALCDCTVIT
SAHPSPLSARRGFFGSKPYSNANAALVSAGLSPVDWSC
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcgagcaaatgcacccaacctggcagcaggcactggccacaagcaaaccgttg
ctcgacgaacttgagctcaaggtggcggctagagaaactgaaatggtgccggccatggcg
caggtcatgaaggcatttgagatgccgcttgatcaggtgcgagtgttgattgttggccaa
gacccgtacccgactgccggtcacgccatcggattgtcgtttgcggttgccaaggacgta
aagcctcttccgcgcagtctcaaaaacatgatgatcgagctcaaggatgatctaggtaaa
ggcgtatctagcgaaggcgaccttactcgctgggttcagcagggtgtatttcttctgaac
cgtcacctgactacggacctgtctgaacctggtgctcactcgaacctaggttgggcgcag
ttcaccgacagggtggttgcagtgctgaatcggcaggttggtagaaatctggttgccatt
ttgtggggcaatcaggcacaggaactaaaaggtgcgctttgcgactgcaccgtaatcaca
tcggcccacccgagcccgctgtcggctcgccgcggattctttggttcaaaaccatattca
aatgcaaatgctgcactcgtttcggctgggctttcgccggtcgattggtcctgttag
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