Rhodoluna sp. KAS3: RKAS3_09880
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Entry
RKAS3_09880 CDS
T09960
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhok
Rhodoluna sp. KAS3
Pathway
rhok03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RKAS3_09880 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhok03019
]
RKAS3_09880 (groL1)
03110 Chaperones and folding catalysts [BR:
rhok03110
]
RKAS3_09880 (groL1)
03029 Mitochondrial biogenesis [BR:
rhok03029
]
RKAS3_09880 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhok04147
]
RKAS3_09880 (groL1)
Enzymes [BR:
rhok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RKAS3_09880 (groL1)
Messenger RNA biogenesis [BR:
rhok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RKAS3_09880 (groL1)
Chaperones and folding catalysts [BR:
rhok03110
]
Heat shock proteins
HSP60 / Chaperonin
RKAS3_09880 (groL1)
Mitochondrial biogenesis [BR:
rhok03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RKAS3_09880 (groL1)
Exosome [BR:
rhok04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RKAS3_09880 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
RKAS3_09880 (groL1)
Exosomal proteins of breast cancer cells
RKAS3_09880 (groL1)
Exosomal proteins of colorectal cancer cells
RKAS3_09880 (groL1)
Exosomal proteins of bladder cancer cells
RKAS3_09880 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
BDS49411
LinkDB
All DBs
Position
complement(1016169..1017785)
Genome browser
AA seq
538 aa
AA seq
DB search
MAKIIHFNEEARRGMERGLNILADTVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPFERIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPISLKRGIE
KAVAAVTVELIANAKPVETKEQIAATASISAGDSQIGELIAEAIDKVGREGVVTVEESNT
FGIELELTEGMRFDKGYISAYMVTDPERQEAVLEDAYVLIANSKISNIKDLLPIVDKVIQ
ANKPLLIIAEDIEGEALATLIVNKIRGIFKSVAVKAPGFGDRRKAMLQDIAILTGAQVIS
EEVGLKLDATTLDLLGRARKVVITKDETTIVEGAGDQDMIAGRVEQIRREIDNTDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
GKTAFEKLSLTGDEATGANIVRVAISAPLKQIAINAGLEPGVVAERVASLPSGQGLNAAT
GEYVDMLQAGINDPVKVTRSALQNAASIAGLFLTTEAVVAEKPEPAAPAAAPQGGMDF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaatcattcacttcaatgaagaggcccgtcgcggtatggagcgcggcctgaac
atccttgctgacacagtcaaggtaacccttggcccacgcggccgcaacgttgttcttgaa
aagaagtggggcgccccaaccatcaccaacgatggtgtttcgatcgccaaggagatcgag
ctggacgacccattcgagcgcatcggtgcagaactggttaaggaagttgccaagaagact
gacgacgttgctggtgacggaaccactaccgcaaccgttcttgctcaggctcttgtgcgc
gaaggccttcgtaacgtggctgctggtgcagacccaatcagcctgaagcgcggcatcgaa
aaggccgttgctgccgtaaccgtagagctaatcgcaaacgcaaagccggtagagaccaaa
gagcagattgcggcaaccgcatctatctcagctggtgactcacaaatcggtgaactaatc
gcagaggcaatcgacaaggttggccgcgagggcgttgtaaccgttgaagagtcaaacacc
ttcggcattgagcttgaactaaccgagggtatgcgcttcgacaagggttacatctcggct
tacatggtcaccgacccagagcgccaagaagcagttcttgaagatgcatacgttttgatt
gcaaactcaaagatctcaaacatcaaggacctgctgccaatcgttgacaaggttatccag
gccaacaagccactgttgatcattgctgaggacatcgagggcgaggctcttgcaaccctt
atcgtcaacaagatccgcggaatcttcaagtctgtggctgtgaaggcaccaggttttggt
gaccgtcgcaaggctatgcttcaggacatcgcaatcttgaccggcgcacaggttatctct
gaagaggttggcctaaagctagacgcaaccactcttgacctattgggtcgcgctcgcaag
gtagtaattaccaaggacgagaccaccattgttgagggtgcgggtgaccaggacatgatt
gctggccgcgtcgagcagattcgccgcgagattgacaacaccgacagcgactacgaccgc
gagaagctccaggagcgcctagcgaagctggccggcggtgttgcagttatcaaggctggt
gctgccactgaggtagagctaaaggagcgcaagcaccgcatcgaagatgctgttcgtaac
gccaaggctgcagttgaagaaggcatcgttgctggtggtggtgttgcattgctacaggct
ggcaagactgcatttgagaagttgtcattgactggcgacgaagcgaccggtgcaaacatc
gttcgcgttgcaatctcagctccactaaagcagatcgcaatcaacgcaggtctagagcct
ggcgtagttgccgagcgcgttgctagcttgccatcaggccagggcctaaacgcagctacc
ggcgagtacgttgacatgcttcaggcaggaattaacgacccagtgaaggtaacccgttct
gcacttcagaacgcagcctcaattgcaggtctattcttgaccaccgaagctgttgttgct
gagaagccagagccagctgctccggctgctgcaccacagggtggcatggacttctaa
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