Rhodopseudomonas sp. BAL398: RBJ75_02295
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Entry
RBJ75_02295 CDS
T10316
Name
(GenBank) alanine racemase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rhol Rhodopseudomonas sp. BAL398
Pathway
rhol00300
Lysine biosynthesis
rhol00470
D-Amino acid metabolism
rhol01100
Metabolic pathways
rhol01110
Biosynthesis of secondary metabolites
rhol01120
Microbial metabolism in diverse environments
rhol01230
Biosynthesis of amino acids
Module
rhol_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhol00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RBJ75_02295
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RBJ75_02295
Enzymes [BR:
rhol01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RBJ75_02295
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WOK18383
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Position
501077..502324
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AA seq
415 aa
AA seq
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MSVAADEAVDSDAAVFALAQRHGTPLFLYDAPMMRDAAARLRRAAPPGAQLFYAVKANPA
PGVIRLFAALGLGAEVASGGELQLALDCGVAPDAIVFSGPAKTASELAAAAEAGIYAVQA
ESWDELAVLQNVCAQRGLTARVALRVNLGSVGARRGGWGGVSPFGMDQAALDYVVAHAAR
LDRLRIIGVHNHQSSQTLDPHHLVARFEAFAQVAARLNARFGFDFINFGGGFGAPFYADD
EPIDLDPVRAFFAGLSGGPLGDWRPRIAMESGRFLTGPAGAYVVRVVGVKRCFGVRFALL
DGGIHHMLGLSGTMRALRRPVAVRRLGGRAGEAMEPTELAGPLCTPIDRLAGAAPLPADL
AAGDLLLFGNCGAYAKHASPLNFLGHDWPAEVLRDGARNELLAPRRSFAEVMAQR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggccgccgacgaggccgtcgatagcgatgccgcggttttcgcgctggcgcag
cgccatggcacgccgctgtttctctatgacgcgccgatgatgcgcgacgcggcggcgcgg
ttgcgacgcgcggcgccgcccggtgcgcaactgttctacgcggtgaaggccaatccggcg
cccggcgtgatccggctgttcgccgcgctcgggctcggcgccgaagtggcgtccggcggc
gagctgcaactggcgctggactgtggcgtcgcgcccgacgccatcgtgttctccggtccg
gccaagaccgcgtctgaactggcggcagcggcagaggccgggatctatgcggtgcaggcg
gaatcctgggatgaattggcggtgctgcagaacgtctgcgcgcagcgcggcctgaccgcg
cgggtggcgctgcgcgtcaatctcggcagcgtcggcgcgcggcgcggcggctggggcggg
gtgtcgccgttcggcatggatcaggcggcgctggactatgtcgtcgcccacgccgcgcgt
cttgatcggctgcggatcatcggcgtgcataatcaccaatcgtcgcagacgctcgatccg
caccatctggtcgcgcgcttcgaggctttcgcgcaagtcgccgcacggctcaatgcgcgg
ttcggattcgacttcatcaatttcggcggcggttttggcgcgccgttttatgctgacgac
gagccgatcgatctcgacccagtgcgggcgttcttcgccggcctcagcggcggtccgctc
ggcgattggcggccgcgcatcgcgatggaatcgggccggtttctgaccggcccggccggc
gcctatgtggtgcgcgtcgtcggcgtgaagcgctgcttcggcgtgcgcttcgcgctgctc
gacggcggcattcatcacatgctgggcctgtccggcacgatgcgcgcgctgcggcggccg
gtcgcggtgcggcgtctcggcggccgggcaggggaagccatggagccgactgaactggcc
gggccgctgtgcaccccgatcgaccggctggccggcgcggcgccgctgccggcggatctc
gccgccggcgatctgctgctgttcggcaattgcggcgcctatgccaaacacgccagcccg
ctgaatttcctcggccacgactggccggccgaagtgttgcgcgacggcgcacgcaacgaa
ctattggcgccgcgccgctccttcgcggaggtgatggcgcagcgttag
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