Rhodopseudomonas sp. BAL398: RBJ75_05020
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Entry
RBJ75_05020 CDS
T10316
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rhol Rhodopseudomonas sp. BAL398
Brite
KEGG Orthology (KO) [BR:
rhol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhol03009
]
RBJ75_05020 (rimO)
Enzymes [BR:
rhol01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RBJ75_05020 (rimO)
Ribosome biogenesis [BR:
rhol03009
]
Prokaryotic type
ribosomal protein modification factors
RBJ75_05020 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WOK18890
LinkDB
All DBs
Position
complement(1072701..1074026)
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AA seq
441 aa
AA seq
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MQQASAPKISFVSLGCPKALVDSERIITRLRAEGYELARNHDGADLVIVNTCGFLDSAKT
ESLGAIGEAMAANGKVIVTGCMGAEPEQIEAAYPGVLSISGPQQYESVLDAVHRAKPPLH
NPHLDLVPPQGIKLTPRHYAYLKISEGCNNRCSFCIIPKLRGDLVSRPAGEVLREAEKLV
SAGVKELLVISQDTSAYGVDLKYATSPWQDREVRARFYDLAKELGELGAWVRLQYVYPYP
HVDEVIGLMTDGKILPYLDIPFQHASPDVLKQMKRPAAQDKTLERIKRWREQCPELTLRS
TFIVGFPGETESDFAYLLDWLEEAQIDRVGAFKYEPVAGASSNALGHAVPDEIKQERWNA
LMARQQTISARRLKRKVGTRQQVIVDEVGPTVSKGRSKADAPQIDGAVYLSSRRPLRVGE
IVTAKIERADAYDLHGSVAGF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggcctccgcgcccaaaatcagctttgtctcgctgggatgtcccaaggcgttg
gtggattccgagcgcatcatcacgcggctgcgcgccgagggctatgaactcgcccgcaac
catgatggcgccgatctggtgatcgtcaacacctgcggtttcctcgacagcgccaagacg
gaatcgctcggcgccatcggcgaggcgatggccgccaatggcaaagtcatcgtcaccggc
tgcatgggcgccgagcccgagcagatcgaggccgcctatcccggcgtgctgtcgatctcc
ggtccgcagcaatatgaaagcgtgctcgacgcagtgcatcgcgccaagccgccgctgcac
aatccgcatctcgatctggtgccgccgcagggcatcaagctgacgccgcgacactacgct
tatctgaagatttccgaaggctgcaacaaccgctgcagcttctgcatcatccccaagctg
cgcggcgatctggtctcgcggccggcgggcgaggtgctgcgcgaggccgagaagctggtc
agtgccggggtcaaggaattgctggtgatctcgcaggacacttcggcttacggcgtcgac
ctgaaatacgcgacgagcccgtggcaggaccgcgaggtccgcgcccgcttctatgatctg
gccaaagagcttggcgaattgggcgcctgggtccggctgcaatatgtctacccctacccg
catgtcgacgaggtcatcggcctgatgaccgacggcaagatcctgccctatctcgacatc
ccgtttcagcacgccagcccggacgtcctgaagcagatgaagcgcccggcggcgcaggac
aagacgctggagcggatcaagcgctggcgcgagcaatgcccggagctgacgctgcgctcg
accttcattgtcggctttcccggcgagaccgaaagcgacttcgcctatctgctcgactgg
ctcgaggaagcccagatcgaccgcgtcggcgccttcaaatacgagccggtggccggcgcg
tcatccaacgcgctcggccatgcggtgcctgacgagatcaagcaggagcgctggaacgcg
ctgatggcgcgtcagcagacgatctcggcgcggcggctgaagcgcaaggtcggcacccgc
cagcaggtgatcgtcgacgaggtcggccccaccgtgtcgaagggccgctccaaggccgac
gccccgcagatcgacggcgcggtgtatctgtcgagccgccgcccgctacgggtcggcgag
atcgtcaccgccaagatcgaacgcgccgacgcctatgatctgcacggcagcgtcgcggga
ttttga
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