Rhodopseudomonas sp. BAL398: RBJ75_07450
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Entry
RBJ75_07450 CDS
T10316
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rhol Rhodopseudomonas sp. BAL398
Brite
KEGG Orthology (KO) [BR:
rhol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhol03032
]
RBJ75_07450 (topA)
03400 DNA repair and recombination proteins [BR:
rhol03400
]
RBJ75_07450 (topA)
Enzymes [BR:
rhol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RBJ75_07450 (topA)
DNA replication proteins [BR:
rhol03032
]
Prokaryotic type
DNA Topoisomerases
RBJ75_07450 (topA)
DNA repair and recombination proteins [BR:
rhol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RBJ75_07450 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Milton
Motif
Other DBs
NCBI-ProteinID:
WOK19341
LinkDB
All DBs
Position
1553175..1555961
Genome browser
AA seq
928 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGASYEVLASFGHVRDLPAKNGSVDPDANFQMIWEIDPKAAG
RLNDIAKALKGADKLILATDPDREGEAISWHVLEVLREKRAIKDHKIERVVFNAITKQAV
TEAMKNPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
EMEIEKFLPREYWSLVATLTTPRGDSFETRLVGADGKKIQRLDIGTGAEAEDFKQAIESA
NFTVSSVEAKPAKRNPYAPFTTSTLQQEASRKLGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIDVSAITQAREVIGEDYGKKYVPETPRQYVAKAKNAQEAHEAIRPTDLSR
RPDALRARLDHDQIRLYELIWIRTIASQMESAELERTTVDIAAKAGSRVLELRATGQVVK
FDGFLAVYQEGRDDDSDDEDSRRLPIINQGEDLKKKDLAVTQHFTEPPPRFSEASLVKRM
EELGIGRPSTYASILQVLKDRGYVKLDKKRLHGEDKGRVVVAFLENFFARYVEYDFTAAL
EEKLDRISNNEISWQEVLRDFWTDFIGAVNEIKDLRVTQVLDALDEMLGPHIYAPREDGG
DPRQCPSCGTGKLNLKAGKFGAFVGCTNYPECRYTRPLAADGGGDGDRILGPDPVSGLEV
AVKSGRFGPYIQLGEAKDYAEGEKPKRAGIPKNSSPGDMELELALKLLSLPREVGKHPET
GEPIKAGIGRFGPYVQHEKTYASLEAGDEVFDIGLNRAVTLIAEKILKGPSKRKFGADPG
KPLGEHPSLGTVAVKGGRYGAYVTAGGVNATIPSDKTEDGITLAEAIALIDERAAKGGGK
TKKVAKKKAPAKKTAAKSDAKSDAKSDAEGKPAKKVVKKAVKKKAAAKPKAESAAASKAR
APVTAKTSTANAAAKSKPVAKKSAGKNG
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcattgtcgagtcgcctgcgaaggccaagacgatcaacaaatatttgggc
gcgtcgtatgaggtcctggcctcattcgggcatgtgcgcgaccttccggcgaagaatgga
tcggtcgatccggacgccaattttcagatgatctgggaaatcgaccccaaagcagccggg
cggttgaacgacatcgccaaggcgctgaagggggccgacaagctgatcctcgccaccgac
cctgatcgcgagggcgaagcgatctcctggcatgttcttgaggtgttgagagaaaagcgc
gcgatcaaggatcacaagatcgaacgcgtggtgttcaacgcgatcaccaagcaggccgtt
accgaggcgatgaagaatccgcgccagatcgacggcgcgctggtcgacgcctatatggcg
cgccgcgcgctcgactatctggtcggcttcacgctgtcgccggtgctgtggcgcaaattg
cccggcgcccgctccgccggacgggtacagtcggtggcgctgcggctggtatgcgaccgc
gagatggagatcgagaaattcctgccgcgcgaatattggtcgctggtggcgacgctcacc
acgccgcgcggcgacagtttcgagacccgcctggtcggcgccgacggcaagaagatccag
cggctcgatatcggcaccggcgccgaggccgaggatttcaagcaggcgatcgaaagcgcc
aatttcacggtgtcctcggtcgaggccaagccggcgaagcgcaacccttatgcgccgttc
accacctcgacgctgcaacaggaggccagccgcaagctcggctttgcgcccgcccacacc
atgcggatcgcgcagcggctctatgagggcatcgacatcggcggcgagaccaccggtctc
attacctatatgcgaaccgacggcgtccagatcgacgtctcggcgatcacccaggcgcgc
gaggtgatcggcgaggattacggcaagaaatatgttcccgagacgccgcggcaatatgtg
gccaaggccaagaatgcccaggaagcgcatgaagcgatccgcccgaccgacctgtcgcgc
cgccccgacgcgctgcgcgcccggctcgaccatgatcagatccggctctacgagctgatc
tggatccgcaccatcgccagccagatggaatccgccgaactcgagcgcaccaccgtcgat
atcgccgccaaggccggatcgcgggtgctggaattgcgcgccaccggccaggtggtgaag
ttcgacggctttctcgcggtctatcaggaaggccgtgacgacgattccgacgatgaggac
agccgccggctgccgatcatcaaccagggcgaggatctgaagaagaaggacctcgccgtc
acccagcatttcaccgaaccgccgccgcgtttctccgaagcctccttggtgaagcggatg
gaagagctcggcatcggccggccctcgacctatgcgtcgatcctgcaggtgttgaaggac
cgcggctacgtcaagctcgacaagaagcgtctgcacggcgaggacaagggccgcgtcgtg
gtggcgttcctggagaacttcttcgcccgctacgtcgaatacgacttcaccgcggcgctc
gaagagaagctcgatcggatctccaacaacgagatctcctggcaggaagtgctgcgcgat
ttctggaccgacttcatcggcgccgtgaacgagatcaaggatctgcgggtgacgcaggtg
ctggacgcgctcgacgagatgctgggaccgcatatctacgccccgcgcgaggatggcggc
gatccgcggcaatgcccgagctgcggcaccggcaagctcaacctcaaggccggcaagttc
ggcgcctttgtcggctgcaccaactatccggaatgccgctacacccgtccgctggcggcc
gatggcggcggcgatggcgatcgcattctcggccccgatccggtgtcgggcctcgaagtc
gcagtcaagtccggccggttcgggccctatatccagctcggcgaggcaaaggattacgcc
gagggcgagaagcccaagcgcgccgggattccgaagaactcctcgcccggcgacatggag
ctggagctggcgctcaagctgctgtcgctgccgcgcgaagtcggcaagcatcccgagacc
ggcgagccgatcaaggccgggatcggccgcttcgggccttacgttcagcatgagaagacc
tatgcaagcctcgaagccggcgacgaagttttcgatatcggcctgaaccgcgcggtcacg
ctgatcgccgagaaaatcctcaagggcccgagcaagcgcaaattcggcgccgaccccggc
aagccgctcggcgagcatccgtcgctcggcaccgtcgccgtcaagggcggccgctacggc
gcctatgtgaccgccggcggcgtcaacgccaccatcccgagcgacaagaccgaggacggc
attacgctggcggaagccatcgcgctgatcgacgagcgcgccgccaagggtggcggcaag
accaagaaggtcgccaagaagaaggcgccggccaagaagaccgcggccaagtctgatgcc
aagtcggatgccaaatccgacgccgaaggcaagcccgccaagaaagtcgtcaagaaggcg
gtcaagaagaaagccgccgccaagccgaaggccgaaagcgccgccgccagcaaggcgcga
gcgccggtgacggcgaaaacctcgacggcgaacgccgctgccaagtcaaaacctgtcgcc
aagaagagcgccggcaagaacggataa
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