Rhodopseudomonas sp. BAL398: RBJ75_12410
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Entry
RBJ75_12410 CDS
T10316
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rhol Rhodopseudomonas sp. BAL398
Pathway
rhol03018
RNA degradation
Brite
Enzymes [BR:
rhol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RBJ75_12410
Messenger RNA biogenesis [BR:
rhol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RBJ75_12410
Ribosome biogenesis [BR:
rhol03009
]
Prokaryotic type
rRNA helicases
RBJ75_12410
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WOK20266
LinkDB
All DBs
Position
complement(2596342..2598336)
Genome browser
AA seq
664 aa
AA seq
DB search
MTFLTTSPPLARALAERNYNDPTPVQTAVLAEAAVDRDLLVSAQTGSGKTVAYGLAIADN
LLAGAERFERAAAPLALIVAPTRELALQVHRELAWLYQYANARVVSCVGGMDPRAEMREL
QAGAHIVVGTPGRLCDHLRRGRLDVSELKAVVLDEADEMLDLGFRDDMEFILKTTPATRR
TLLFSATLPRGIVALAKQYQSSAFRVEVAGTEGGHADIEYRAIRIAPSDGEHAVVNVLRF
YESPSTIVFCNTRNAVKHLQTSLLERGFSVVALSGELTQNERTMALQSLRDGRARVCVAT
DVAARGIDLPNLDLVVHADLPNDAEVMQHRSGRTGRAGRKGISVLLVPPARKRRAELLLQ
LAGIDAVWGVAPGADEIRSLDQKRMLGDALFADAATEDDLVLARTLLAERSAEDIAVALA
RLYRARLPSPEDILDANDRGNRASRDDRGAAKGVRAPRGEARAPREPRSRDEPPRAHKAK
PGKHGMDGGSVWFRAAIGRKKNAEARWLLPMICRRGGIDKHEIGAIRILDTSTEFEIAAS
AADSFAALVGRPDKEDNIRIEPLGEPTAAEPRGEKPPRRDAYTVSDNGSGFENAPPEPRA
ERPRPKPFDFKGGEAGAKAKPKYDKPFQTRPDYVKRDAKPSRDDKPRDYANASKKNKAKN
KNRG
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
gtgacattcttgaccaccagcccgccgctcgcccgagccttggcggagcgcaattacaat
gacccgaccccggtgcagaccgcggttttggccgaggccgccgtcgaccgcgatctgctg
gtgtcggcgcagaccggctccggcaagaccgtcgcctatgggctggcgatcgccgacaat
ctgctggccggcgccgaacgcttcgagcgcgccgcggcgcccttggcgctgatcgtggcg
ccgacccgcgaattggcgctgcaggtccaccgcgaactcgcctggctgtatcaatacgcc
aatgcccgggtggtctcctgcgtcggcggcatggacccgcgcgccgagatgcgcgagctg
caggccggcgcccatatcgtggtcggcacgccgggacggctgtgcgaccatctgcgccgc
ggccggctcgatgtctcggaactgaaagccgtggtgctcgacgaggccgacgagatgctc
gatctcggctttcgcgacgacatggaattcatcctcaagaccacgccggcgacccgccgc
actttgctgttctcggcgacgctgccgcgcggcatcgtggccttggccaagcaatatcag
agcagcgcgttccgcgtcgaagtcgccggcaccgagggcggccacgctgatatcgaatat
cgcgccatccggatcgcgcccagcgacggcgagcacgccgtggtcaatgtgctgcggttc
tacgaatcccccagtacgatcgtgttctgcaacacccgcaacgcggtgaagcatctgcag
acctcgctgctggagcgcggcttctcggtggtggcgctgtcgggcgagctgacccagaat
gagcgcaccatggcgctgcaatcgctgcgcgatggccgcgcccgcgtctgcgtcgccacc
gacgtcgccgcgcgcggcatcgatctgccgaatctcgatctggtggtgcacgccgacctg
cccaacgacgccgaagtgatgcagcatcgctccggccgcaccggccgggccgggcgcaag
ggcatcagcgtgttgctggtgccgccggcgcgcaagcgccgcgccgaattgctgttgcag
ctggccggcatcgacgcggtgtggggcgtggcgcccggcgccgacgagatccgcagcctc
gaccagaagcgcatgctgggcgacgcgctgttcgccgacgccgccaccgaggacgatctg
gtgctggcgcgcaccctgctggccgagcgctcggccgaagacatcgcggtggcgctggcg
cggctgtatcgcgcccgcttgccgtcgccggaagatattctcgacgccaatgaccgcggc
aatcgcgcgtcgcgcgatgaccgcggcgccgccaagggtgtgcgcgccccgcgcggcgag
gcgcgagcgccgcgcgagccgcgcagccgtgacgagccgccgcgcgcccacaaggccaag
ccgggcaagcacggcatggatggcggcagcgtctggttccgcgctgcgatcggccgcaag
aagaacgccgaggcgcgctggctgctgccgatgatctgccgccgcggcggcatcgacaag
cacgagatcggcgcgatccggattctcgatacctcgaccgaattcgagatcgcggcttcc
gcggccgacagtttcgccgctctggtcggccgtcccgacaaggaagacaatatccggatc
gagccgctcggcgagcccaccgccgccgagccgcggggcgagaaaccgccgcgccgcgac
gcctacaccgtctccgacaatggctccggtttcgagaacgcgccgcccgagccgcgcgcc
gagcgcccgcgtcccaagccgttcgacttcaagggcggcgaggccggcgccaaggccaag
ccgaaatacgacaagccgttccagacccggcccgactacgtcaagcgcgacgccaagccg
tcgcgcgacgacaaaccgcgcgactacgccaacgcttcgaagaagaacaaggccaagaac
aagaaccgcggctga
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