Rhodopseudomonas sp. BAL398: RBJ75_13940
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Entry
RBJ75_13940 CDS
T10316
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhol Rhodopseudomonas sp. BAL398
Pathway
rhol03420
Nucleotide excision repair
rhol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RBJ75_13940
03430 Mismatch repair
RBJ75_13940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhol03400
]
RBJ75_13940
Enzymes [BR:
rhol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBJ75_13940
DNA repair and recombination proteins [BR:
rhol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBJ75_13940
MMR (mismatch excision repair)
Other MMR factors
RBJ75_13940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WOK20544
LinkDB
All DBs
Position
complement(2943272..2945290)
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AA seq
672 aa
AA seq
DB search
MMGTSQWQPFTIADEDIIWASQMMGLGPDGFAKVGNDESRLAAIRNLDSADFEACPGSGK
TTLLVAKLAILANRWRWRRQGICVLSHTNAARNEIGTKLSSSPIGGALLRYPHFVGTIHA
FVNEFLSVPWLRSKGNLIKAIDTQIALKHRMGLLGRNWKAAMEARHLTEFALMYGRADYT
ADNKGNLGAATPLARAMVAATKSSSEAGYFCYDEMFVWANELLDTRPEVAAALRERFPLV
FIDEAQDNSELQSALLHRLFLEGDNPSRRQRFGDSNQAIYSSVDDKAGAHTDPFPSQIRF
DLPRSYRFNQTIANQVKGLGVIPQQLIGAGPGASVVKTEPKATTVILFDDESMSNVLPRY
GAHLVEQFTENELRAGVFVAVAGVVKEPEQPDPVPRFIGNYAPTFDPACGRRDSLQTTFA
QYLARARFEMNKLRDVSSLVNATASAVLRLADIAGADLSLYSRKSPHRRVKELLDGKAAD
YNALIELVLVHKGDLSKAEWEESGKALAVSVAKAIAGNAPPTTNAFLAWPEHGSGSEVEE
ESVATRTDNLFSYPPDGPKVHVRLGSIHSVKGETHTATLVLESYFHDHHLSELKAWLLGA
RSGGFKKGNKMEGPRLLGRLRLHYVAMTRPSHLLCIAMRKDAFTEAETTILRDRGWLIID
CCSAPEAIAKPT
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgatgggcacctcccagtggcaaccgttcacgattgcggacgaagacatcatctgggca
tcccagatgatggggctcggacccgacggcttcgcgaaagttggaaacgacgaaagccgc
cttgccgcaatccgcaacttggacagcgcggatttcgaggcttgtcccggtagcggcaaa
acgacccttctcgtcgccaagcttgctattctcgccaatcgctggcgctggcgccgacag
ggtatctgcgtgctttcgcataccaacgccgcgcgcaacgaaatcggcaccaaactcagt
tcctcacctattggcggcgctctccttcgctatccgcatttcgtcggcaccatccacgcg
ttcgtgaacgagtttctgtcagtcccgtggctgcgatcaaaaggcaatcttatcaaggcc
atcgacacgcaaatcgcactgaaacaccggatgggactgctgggccggaactggaaggcg
gcgatggaagcccgccatctcacagagttcgcgctcatgtacgggagggccgactacacc
gccgacaacaaaggcaacttgggagcggcgacgccattagcccgtgcgatggtcgcggcg
acgaagtcgtcgagtgaggcgggctatttttgctacgatgagatgttcgtctgggcgaac
gagctgcttgatacgcgacccgaagttgcggccgctctgcgagagcggttccctcttgtc
ttcatcgacgaggcgcaggacaacagcgaactccagtccgcgctcctgcaccgcctcttc
ctcgaaggtgacaacccttcgcgccgccagcgcttcggcgactcaaatcaggcgatctac
agcagcgttgacgacaaggccggcgcgcacaccgatccgtttccgagccagattaggttc
gaccttccgcggagctaccgtttcaatcagaccatcgctaaccaggtaaaaggcctcggc
gtcattccgcagcaattgatcggcgcgggtcccggcgcctcggtcgtaaagacggagcca
aaggcgacgacggtgatcctcttcgacgacgagagcatgagcaatgtgctgccgcgctac
ggagcgcatcttgtcgaacagttcaccgaaaacgagcttcgggcgggagtcttcgtggcc
gtcgcgggcgtcgtgaaggaaccggagcagcccgatccggtgccccgcttcattggaaat
tacgccccgacattcgatccggcatgcgggcggcgggattccttacagacgaccttcgcc
caataccttgcgcgcgcgcgctttgagatgaacaaattgcgggacgtatcttcgctcgtc
aacgctactgcgtccgccgttctccgcctcgccgacatcgcaggggcggacctcagcctc
tacagtcggaagtcgcctcacaggcgggtcaaggaactgctcgacggtaaagcggcagac
tacaatgctctcatcgaacttgtcctcgtgcataagggcgatctttcgaaggccgagtgg
gaggaaagcggcaaagcgctcgcagtctcggtcgccaaggccatcgcgggcaatgcccca
ccaaccacaaacgcgtttcttgcctggccagagcacggcagcggctcggaggtcgaagaa
gagagcgtcgccacaaggaccgacaatctcttcagctacccgcccgacgggcccaaggtg
catgtacgcctcggttcaatccattcggtaaagggcgagacccacaccgcgaccctcgtg
ttggagtcctattttcacgaccaccatctgagcgagttgaaagcatggctcctgggagca
cggtccggcggcttcaaaaaggggaacaagatggaaggaccccgtcttctggggcgcctg
cggctccattacgtcgccatgacgcgaccatcacaccttctgtgcatcgccatgaggaag
gatgccttcaccgaggccgaaaccacgatcctacgggatcgcggctggctgatcatcgat
tgctgcagcgcgccggaagccatcgcgaagccgacttag
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