Rhodopseudomonas sp. BAL398: RBJ75_14065
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Entry
RBJ75_14065 CDS
T10316
Name
(GenBank) strawberry notch family protein
KO
K26273
protein strawberry notch
Organism
rhol Rhodopseudomonas sp. BAL398
Brite
KEGG Orthology (KO) [BR:
rhol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rhol03036
]
RBJ75_14065
Chromosome and associated proteins [BR:
rhol03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
RBJ75_14065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-ProteinID:
WOK20566
LinkDB
All DBs
Position
complement(2969010..2973389)
Genome browser
AA seq
1459 aa
AA seq
DB search
MTPSSSSTALSTAARLSASLASGDAAARIFAAARLIVAQLERGRRIDAAGLRATMETAFA
GSDADGAWDWKSAYDACEAATVLFLRKFGPAMRSRAASPDAMLPMLTKISGILPTHTRRS
EESQALQQFSTPIGLGLAASAAAAITPSDVVLEPSAGTGLLAILAELSGATLTLNELAVT
RAGLLELLFPDVSVTRFDGAQIDDHLDARITPSVVLMNPPFSALANVDRRMGDAALRHIS
SALARLGDGGRLVAITGANCASDNPTWRDAFIDLQQRGQVVFSAAIDGAVFARHGTTLDT
RLTVIDKQAADNPRVFPTSLGVAPDVVTLLGWIKESLPPRLPVALPQALPSIVRSVPGLG
HAQQPVVIRPSSFPVQLPRPEAIELDYQTADWKPVQGGDITDALYEAYSLQSIRIPDAKT
HPTKLVQSAAMASVAPPKPSYHPHLPAEVVERGLLSDAQLETVIYAGEALSQYLAGSWSV
DPTFDIVAAARDDAETSVRFRMGFMLGDGTGAGKGRQVAGILLDNWLKGRRRAIWISKSD
KLIEDAQRDWSALGQERLLVTPLSRFRQGTPIRLEQGILFTTYATLRSDARDDKISRVRQ
IVEWLGDNSGSETGAGFDGVIIFDESHAMQNAAGGKGERGDQAASQQGRAGLRLQHALPN
ARIVYVSATGATTVHNLVYAQRLGLWGGDDFPFATRAEFVEAIEAGGVAAMEVLARDLKA
LGLYTARSLSYEGVEYQLVEHRLTEEQIRIYDGYAGAFSIIHNNLDAALRAANVTGTSGT
LNAQAKSAARSAFESAKQRFFNHLITAMKVPSLIASVERDLNDGHAAVIQIVSTGEAPME
RRLAEIPTDEWGDVQVDITPREYVLDYLAHSFPTQLYEPFTDSEGNLSSRPVFRDGQPVQ
CRDAVARRDRLIERLASLPAVHGALDQIVQRFGSDMVAEVTGRSRRIIRRTDPDGVDRLK
VENRAGSANLAEAQAFMDDAKRILVFSEAGGTGRSYHAELSAKNRRLRVHYLLEAGWKAD
AAIQGLGRTNRTNQAQPPLFRPVATDVKAEKRFLSTIARRLDTLGAITKGQRQTGGQGLF
RAEDNLESHYARDALRQLYLLLVNGKIADCSLQTFEDATGLKLTDTNGIKDDLPPITTFL
NRLLALTIDLQNVLFAAFEQLLTARVEGAIASGTFDAGLETLTAESFTVTGRQTIYTHPG
TSAETRLLTITQRERNRPVTLDEALQCLADPRARCLVNAQSGRAAVQVPARSIMLDDGEV
ERRVRLIRPMEHPMLPLALMPQTHWQDADRETFARAWEAELAEVPEFTSTEIHIVTGLLL
PIWKRLPNESTRVYRLQTDTGQRIIGRKVSPAWAATATETGILSMTPDAAFAALLDGKTI
IDLAESLQLRRARVMGVNRIELTGFTEAMRDRLRAYGLFSEIISWKLRFFVPLDATGTAV
LAKVLEHYPVLRISDRAAA
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgtcttcttcctccacggccctgtccacagccgcgcgattatcagcgtcgctg
gccagcggcgatgccgccgcgcgcatcttcgccgccgcgcgattgatcgttgcgcaactg
gagcgcggccgccgcatcgatgcggctggcctccgcgccacgatggaaacagccttcgcc
ggttcggatgccgatggcgcctgggactggaagagcgcctacgacgcttgcgaagccgcg
accgtcctgttcctgcgcaaattcggcccggcgatgcgctcacgtgccgcgtcgcccgac
gccatgctgccgatgctgacgaagatctccggcattcttcccacccatacgcgacgctcc
gaagaaagccaggcgctgcagcaattcagcacgccgatcgggcttggactggcggcttcc
gccgctgcggcaatcaccccctccgacgtcgtactcgagccgtcggccgggaccgggttg
ctggccattctcgctgaattgtccggcgcgacactcaccctgaatgaacttgccgtgacc
cgtgctggcttgctcgagctgttgttccccgacgtctccgtcacccgcttcgacggcgcg
cagatcgacgatcatctcgatgcgaggatcacgccgagcgttgtgctgatgaacccgcca
ttttccgcactcgccaatgtcgatcgccggatgggtgacgctgcgttgcgccatatttcg
tcggcgctggcgcggctgggcgatggcggtcgtctggtcgcgatcaccggcgccaattgt
gcgtccgacaatccgacctggcgcgacgcctttatcgacctgcagcagcgcgggcaggtg
gtattctccgcggcgatcgacggggcggtctttgcccgccatggcaccaccctggacacc
cgcctgaccgtgatcgacaagcaggcggccgacaacccccgcgtgtttccgacatcacta
ggcgtggctcccgatgttgtcacgctgctcggctggatcaaagaatctttgccaccgcgg
ttgccggtcgcgcttccgcaagcactcccttcgatcgtccgatcggtgccgggcctcggt
cacgcacagcagccggtcgtcatcaggccttcctccttcccggtccagctcccccggccg
gaagcgattgagctggactatcagaccgccgactggaagcccgtccagggcggcgacatc
accgacgcgctgtatgaagcctacagcttgcagtcgatccggattcccgacgccaagact
catccgaccaagctggtacagtcggcggcgatggcctcggtggcgccgccgaagccgagc
tatcacccgcatctgcccgctgaggtcgtcgaacgcgggctcttgtcagatgcccagttg
gaaactgtgatctatgccggcgaggccctttcgcagtatctcgcgggatcctggagcgtt
gacccgacgttcgacatcgtcgccgccgcgcgtgacgacgccgagacctcggttcgcttt
cgcatgggcttcatgctcggtgacggcaccggcgccggcaagggccgccaggtcgccggc
atcctgctcgacaattggctgaagggacggcgcagggcgatctggatcagcaagtccgac
aagctgatcgaggatgcccagcgcgactggtcggcgctcggacaggaacgattgctggtg
acaccgctgtcgcgattccggcaaggcaccccgatccgtctcgagcaaggcatccttttt
accacctatgccacgctgcgctccgacgcccgcgacgacaagatatcgcgggtccggcag
atcgtggaatggttgggcgacaattctggctccgagaccggggccggtttcgacggcgtg
atcatcttcgacgagtcccacgcgatgcagaatgctgcaggcggcaagggcgaacgcggc
gaccaggctgcctcgcagcagggtcgcgccggtcttcgcctgcaacacgcgctccccaat
gcgcgtatcgtctatgtctccgcgaccggcgccaccacggtgcataacctcgtctatgcg
cagcgcctcgggctgtggggcggcgatgactttcccttcgccacccgcgcggaatttgtc
gaggcgatcgaggccggcggcgtcgcggcgatggaggtgctggcccgcgatctcaaggcg
ctcgggctctatacggcgcgatcgctttcttatgagggcgtggaataccagctggtcgaa
caccggctcaccgaggaacagatccgcatctatgacggctatgctggtgcgttctcgatc
atccacaacaacctcgatgcagcgctgcgcgccgccaacgtcaccggcacctccggcacg
ctcaacgcacaggccaagtcggccgcccgttcggcgtttgaatccgccaagcagcggttc
ttcaaccacctgatcaccgcgatgaaggtgccgtcgctgatcgcctcggtcgagcgagat
ctgaacgatggccatgccgccgtgatccagatcgtctcgaccggcgaggcgccgatggag
cgtcggcttgccgagattccgaccgacgaatggggcgacgtccaggtcgatatcacgccg
cgggaatatgtgttggattacctggcgcattcgttcccgacccagctctacgagccgttc
accgacagcgaaggcaatctgtcgtcgcggccggtgttccgggatggccagccggtgcaa
tgccgcgacgccgtcgcgcggcgcgaccggctgatcgaacgtctcgcctcattgccggcg
gtacacggcgcgctcgaccagatcgtgcagcgctttggctccgacatggtcgcggaagtg
accggacgctcccggcgcatcatccgcaggaccgatccggatggtgttgatcgcctcaaa
gtggagaaccgcgccggctccgccaatctcgccgaggcccaggccttcatggatgacgcc
aaacgcattctggtgttctcggaagcgggcggaaccgggcgctcctatcacgcggagctg
tcggccaagaaccggcggctgcgggtgcattatctgttggaagccggatggaaggccgat
gccgcgatccaggggctcggtcgaaccaaccgcaccaatcaggcacagccgccattattt
cggccggtcgcgaccgatgtgaaggccgagaagcgctttctgtcaaccatcgcgcggcgg
ctcgacacgctcggcgccatcaccaaaggccagcgccagaccggcgggcagggtctgttc
cgcgccgaggacaaccttgaaagccactatgcgcgcgacgccctgcggcaactctatctg
ctgctcgtcaacggcaagatcgccgattgttcgctgcagaccttcgaggacgccaccggc
ctcaagctgaccgacaccaacgggatcaaggacgatctgccgccgatcaccaccttcctc
aaccggctgttggcactgaccatcgatctgcagaacgtcctgttcgccgccttcgagcaa
ctgctgaccgcgcgcgtcgagggcgcgatcgcgtccggcacctttgatgccggcctggaa
accctgaccgccgagagcttcacggtcacaggccggcagacgatctacacccatcccggc
acctccgccgagacccgtttgctcaccatcacccagcgggagcgcaaccggccggtcacg
ctcgacgaggcgctgcagtgtctcgccgatccacgtgcgcgatgtctggtgaacgcccag
tccggtcgcgccgcggtgcaggttccggcgcgtagcatcatgctggacgacggcgaggtg
gaacgaagagttcgtttgatccggccgatggagcatccgatgttgccgttggcgttgatg
ccgcagacccattggcaagacgccgatcgcgagacctttgcgcgcgcctgggaagctgaa
ctggccgaggtgccggagttcacctcaaccgaaatccacatcgtgaccggtttactgctg
ccgatctggaagcggttgccgaatgaatcgacgcgggtctaccggctgcagaccgatacc
ggccaacggatcatcggccgcaaggtgtcacctgcctgggcggcgacagctactgaaacc
ggcattttgagcatgacaccggacgccgcgttcgcggcgttgctcgatggcaagacgatc
atcgatcttgcggaatccctgcagctgcgccgggctcgcgtaatgggcgtgaaccggatc
gaattgaccggcttcaccgaggcgatgcgcgaccgtcttcgcgcctatggtctgttcagc
gagatcatctcctggaagctgcgcttcttcgtgccgctggatgcgaccggcacggcggtg
ctggccaaagtgctggagcactatccggtgctgcggatctccgatcgggctgcggcgtga
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