Rhodopseudomonas sp. BAL398: RBJ75_15980
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Entry
RBJ75_15980 CDS
T10316
Name
(GenBank) autotransporter-associated beta strand repeat-containing protein
Organism
rhol Rhodopseudomonas sp. BAL398
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Motif
Other DBs
NCBI-ProteinID:
WOK15675
LinkDB
All DBs
Position
complement(3372013..3378000)
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AA seq
1995 aa
AA seq
DB search
MSPIRIANKALISSSIEPEQVAVKLISRKASTGAAGIRAMILRGLLSTTAIVGVSAAVVF
ATHANEAAAQTATWIGATSTYLDDANWTGGTAPVAAGRSATFTNTGDATVNVGSAIAPDS
WIFNTNALNYAISGAAVNFGGTGITNNATGNISIANAIGGTGGVTQAGTGILTLSGANTY
TGSTMVTGGTLNVAGTLGRVTLGGGTTLHVSPGGTINTATGPSVNGTGTFTIVNLGAITN
TTGSNINTNGTVALITGSGSTLSSGQNEAFAAAGAGSSIVNAAGATIRGGSDTQYGRVYL
GNSASVTNYGTLAGSATLASGGNTSGALVVGTNSTVNLRAGSTTGNVRLGNGSTLSLYNG
SGTAGAGNTTIDPVTGATITLQTAGTNAAATVGTIAFGTGGTLALRGTGDGTAANGVTGA
WNIANLGGATTLSKQDSGTFVLTGSYGGALATNVIGGRLVASNTAGAFGTGAVAISTGAT
VELSNTTANSVIELPGLAFSGAGTLEKTGAGIVSIGGITQSSIGFAQGGLINVVAGTLRG
STQNHGIWSGNNAGLTIASGATFDGVEGTIRVDALNGAGTLQGGPTTTIGVANGSGVFTG
VIQNSIYAGGTFALTKAGTGTQTLSGTSTYTGATTIAGGALRGGAASSFSANSAFTVGSG
AFLDLGGFNETIGSLGGAGTVTNSGTNAQLSAGGLNQSSTFSGVIQNGAGTVGLVKSGTG
TLTLTGANTYTGGTSVSAGTLQIGTNGSLAGNIVDNATLAFNRPDAVTFAGVVSGSGTLN
QTGAGSTTLTGVNSVGNGQFTGTANVNAGTLAINGTFGDTAGNTALVNVNNGGTLHGSGT
VAGSVVVASGGFVSAGNSPGTLTVAQDYTLAAGSTSLFELGTPGVVGGTDNDLINVGRNL
TLGGTLSAVSSADGAASPVAGEYRLYTYGGTLTGAFASVATPTAQSATVFTNVAGQVNLL
VANAGQNLQYWDGADTTGAAAGGQGGTGNWTAANTNWTASPTSQVDNAWRSGVGIFGGTA
GTVTITGAQSVQGLQFTADGYQLAGAGTLNLTGDAFSTVAQSFINVDAGVGVSIANALTS
TGGTFGLVKIGTGSLTLSGANTYTGLTTVSNGTLAIAAGGSITSDVSNAATFNNAGTVTG
TFANAGTASNSGVITGATTQSAGSLSNTGALRGTLGLTGGSFTNATGGSVVGATTNAGGT
VTNNGGTLAAVTNSSGTFANNSGTAGAVINSATATNAGTVASLTNNSGTFANTGTITGAT
TVSGGAFTTSGTLGGGLTNSATVTANGGAVNGAIANNAGAFNVGGTVTSNNRFANASGAT
LAVTGTGSYTLQGLLTNAGLLTIANGGQLNATAGGLTNTGTVTVAQGGTLRDDLNNAGTV
TNNGNYIANVAFTSGSIANTASGTWTGNVLSNSGSLSNSGTWTGSIVTSGTFTNAAGGTV
SGLVTNSGTTTNAGTFNGGLANTAGTTINNGVINGPVTLSGGSLTGSGRTGNLIASSGAF
APGNGTPGSSMTVNGNLALASAVQYVVQVNPATASFTSVTGTAALGGAAVTAHFARGSYV
TQQYTIVAAAGGRTGTFGALTTTNLPANFNANVSYDANRAFLDLTLDYTRVGGLNRNQQN
VANTLTGYFNRTGGIPMAFGSLSASGLSQVSGELGTGTQQTTFDAMGLFMGLMTDPSSAG
RSTAPQRAIGYADESRRAPRDAFAAMSRKAPEALQFEQRWNVWSAGFGGSQTTDGNAATG
SGTASSRIYGGAAGADYRISPNTTAGFALAGGGTNFSVANGGSGRSDLFQAGGFVRHSVG
ATYLTAALAYGWQDVTTERSVGVDRLGARFTSNALSGRVETGSRFDAPWIDGAGLTPYAA
AQFTTVYLPSYGETAGTASTFGLNYAARDVTASRSELGLRSDRSFGALDGVMTLRGRAAW
AHNFNPDRSVNATFQTLPGAGFVVNGAAQAREAALVTASAEMAWRNGWTVAGTFEGEFSK
VTSSYAGKGVVRYGW
NT seq
5988 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatccggattgccaacaaggctctcatctcatcttcaatcgagccggaacag
gtcgcggtcaagctgatctcccggaaggcatccacgggcgcagccggcattcgcgccatg
atcctccgcggccttttgtcgacgacggcgatcgtcggcgtctccgcggcagttgttttt
gcaacccacgcgaacgaggccgcggcgcagacggcgacatggatcggcgcgacaagtact
tatcttgacgacgcgaactggactggagggacggcgccggttgcagccggtcggtccgcc
actttcaccaacaccggcgatgcgaccgtcaacgtcggcagcgcgatcgcccccgattcg
tggatattcaacaccaacgccttgaattacgcgatcagcggcgccgcggtgaatttcggc
ggaaccggcatcaccaacaatgcgacgggcaatatcagcatcgccaacgcgatcggcggc
accggcggcgtgacccaggccggcacgggcatactgacgctgtcaggcgctaacacctat
acgggcagcacgatggtgaccggcggcacgctcaacgtcgcgggcacgctcggccgcgtg
acgctcggaggcggcacgaccctgcacgtttcccccggcggcacgatcaacaccgcgacg
gggcccagcgtcaacggcaccgggacgttcaccatcgtcaacctgggcgctatcacgaac
acgaccggcagcaatatcaatacgaacggcacggtggcgctgatcaccgggtctggcagc
acgctcagttcgggccagaacgaggcgttcgcagcagctggggcgggcagcagcatcgtc
aatgccgccggcgcgacgatccggggcggctcggacacgcaatacgggcgcgtctatctc
ggaaacagcgcctccgtcaccaattacggcacgctggcgggctccgcgacgctggcgtcc
ggcggcaacaccagcggcgcgctggtcgtcggcacaaacagcaccgtcaatctgcgcgcg
ggctcgacgaccggcaacgtgcggctcgggaatggctcgacgctctcgctctacaacggc
agcggcactgcgggagcaggcaacaccaccatcgatccggtgaccggcgcgacgattacc
ctccagaccgccggcaccaatgcggctgcgacggtgggcacgatcgcgttcggcacgggc
ggcaccctggcgctgcgcggcaccggcgacggcaccgctgccaacggtgtgacgggcgcg
tggaacatagcgaacctgggcggcgccaccacgctcagcaagcaggactccggcaccttt
gtgctgacgggcagctatggcggcgcgcttgccaccaacgtgattggcgggcggctcgtg
gcctcgaacaccgcaggcgccttcggcaccggcgccgtggcgatcagcaccggggccacc
gtcgaactcagcaacacgacggcgaactccgtcattgaactgcccggtctcgccttcagc
ggcgctggcaccctggaaaagaccggagccggcatcgtttcgatcggcggcatcacgcag
agttctatcggcttcgcgcaaggcggcctgatcaacgtcgtcgcagggacgctgcgcggc
tcgacgcagaaccatgggatctggtcgggcaacaatgccgggctgaccatcgcatccggc
gcgaccttcgacggcgtcgagggcaccatccgcgtcgacgcgctcaacggcgcgggaacg
ctgcaaggcggccccacgaccacgatcggcgtagccaatggcagcggcgtcttcaccggc
gtcatccaaaacagcatctatgcgggcggtacgttcgcgctgaccaaggcaggcaccggc
acgcagacgctctcgggcaccagcacctatacgggcgccaccaccatcgccggcggcgcg
ctgcgcggtggggcggccagcagcttcagcgcgaacagcgccttcacggtcggcagcggc
gcgttcctcgatctcggcggcttcaacgagacgatcggttcgctcggcggagccggcacg
gtcaccaactccggcaccaacgcccaactgtcagccggcggcctgaaccaatcttcgacc
ttctcgggcgtcatccaaaacggcgccggcactgtcggactcgtcaagtcaggcaccggc
accctgaccctgaccggcgccaacacctatacgggcggcaccagcgtctctgccggtacc
ttgcagatcggcaccaacggctcgctcgccggcaatatcgtcgacaatgccacgctggcg
ttcaaccggcccgatgcggtgactttcgccggcgtcgtctccggctctggaacgctcaac
cagaccggggcaggcagcacgaccctgaccggcgtcaacagcgtcggcaacggccagttc
accggcaccgccaacgtcaatgccggcacgcttgccatcaatggcaccttcggcgatacg
gcgggcaacaccgcgctggtcaatgtcaacaatggcggcacgctgcacggatctggcacg
gtcgcaggttcggtggtggtcgccagcggcggcttcgtctcggccggcaactcgccgggc
acgctgaccgtcgcgcaggactacacgctcgcggcaggctcgacctccctgttcgaactc
gggacgcctggcgtcgtcggcggcaccgacaacgacctcatcaatgtgggccgcaacctc
acgctcggtggaacgctgagcgcggtgtcgtcggccgacggcgctgcatcgccggtggct
ggcgaatatcgcctctacacctatggcggcacgctgaccggcgccttcgcgtctgtggcc
acacccaccgcacaaagcgcgaccgtgttcaccaacgttgccggccaggtgaatttgctg
gtcgccaatgccggccagaaccttcagtactgggacggcgccgacaccaccggtgcagcc
gccggcggccagggcggcaccggtaactggaccgcggccaataccaactggacggcgtcg
ccgaccagccaggtcgacaatgcctggcggtccggtgtcggcatcttcggcggcaccgcc
gggacggtgacgatcaccggcgcgcagagcgtccagggcctgcaattcaccgctgacggc
tatcaactggctggcgccggcacgctcaatctcaccggcgatgcgttctctacagtggcg
cagagcttcatcaacgtcgacgctggcgttggcgtcagcatcgccaacgcgctcaccagc
acaggcggcacattcggcctcgtcaagatcggtaccggttcgctgacgctgagcggcgcg
aacacctacacgggcctcaccaccgtcagcaacggcacgctggcgatcgcggcgggcggc
agcatcacctcagacgtcagcaacgccgcgacgttcaacaacgccggcaccgtcaccggc
accttcgccaatgccggcacagccagcaacagcggcgtcattacgggtgccaccactcag
tcggcgggatcgttgtccaacaccggcgcgctgcgcggcacgctcggcctgaccggcggc
agcttcacgaacgccaccggcggcagcgtcgtcggcgccaccaccaacgcgggaggcacc
gtcaccaacaacggcggcaccctggcagccgtcaccaacagcagtggcaccttcgccaac
aattccggcaccgccggggcggtcatcaattccgccaccgcgaccaacgccggaaccgtt
gcctcgctgaccaacaacagcggcaccttcgccaacaccggcaccatcaccggcgcgacg
accgtgtccgggggcgcgttcaccacaagcggcacgctcggcggcggcctgacgaactct
gcaacggtcaccgccaacggcggcgccgtgaacggcgccatcgccaacaatgccggcgcg
ttcaacgtcggcggcacggtgaccagcaacaataggtttgccaacgcgtcgggagccaca
ctggctgtcacgggcaccggcagctacactctgcagggactgctgaccaatgccggcctg
ctcaccatcgcgaatggcggccagcttaatgcgaccgccggcgggctgaccaacaccggc
accgtcaccgtggcgcaaggcggtacgctgcgcgacgacctcaacaatgccggcacggtg
accaacaacggcaactatatcgccaatgtcgccttcacctccggcagcatcgccaacact
gcgtccggaacctggaccggcaacgtgctgagcaacagcggatcgctgtccaacagcggc
acctggaccggcagcattgtcacgtccggcacttttaccaacgctgccggcggtactgtc
tccggcctggtgaccaacagcggcaccaccaccaacgccggcaccttcaatggcggcctg
gccaacaccgccggcaccaccatcaacaatggcgtcatcaacggaccggtcaccctctcc
ggcggcagcctgactggttcgggccgcaccggcaacctgatcgccagcagcggcgccttc
gcgcccggcaacggcacccccggctcgtcgatgacggtgaacggcaacctggcactggcg
tcggctgtgcagtatgtggtgcaggtcaacccagccaccgcatccttcaccagcgtcacc
ggcacagcggcgctcggcggcgcggcggtgactgcccactttgccaggggcagctatgtg
acgcagcagtacaccatcgtggctgcggctggcggccgcaccgggacctttggcgcgctc
accacgaccaacctgcctgccaacttcaatgccaacgtcagctacgatgccaatcgggca
tttctcgatttgacgctggactacaccagggttggcggtctcaaccggaaccagcagaat
gtcgccaacacgctgaccggatacttcaaccggaccggcggcatcccgatggcattcggg
tcgctatccgcctctgggctgtcgcaggtctcaggcgaactcggcaccggcacgcagcag
accaccttcgacgccatgggtctgttcatggggctgatgaccgatccctcgagcgctggt
cgcagcacggcaccgcagcgcgccatcggctatgctgacgagtcgcggcgcgcgccgcgc
gacgccttcgcggcgatgtcccgcaaggcgcccgaagcattgcaattcgaacagcgctgg
aacgtctggtcggccggattcggcggatcgcagaccaccgacggcaacgccgccaccgga
tccggcacggcgtcgtcgcggatctatggcggcgccgccggcgccgactatcgcatctcg
ccgaacaccacggccggcttcgcactcgccggcggcggcaccaatttcagcgttgccaac
ggcggcagcggtcgcagcgacctgttccaggcgggcggctttgtccggcacagtgtcggc
gcaacgtacctgaccgccgcattggcctatggctggcaggatgtcacgacggagcgcagc
gtcggcgtcgaccgtctcggtgcccggttcaccagcaatgcattgtcgggccgcgtcgaa
accggcagccgcttcgatgcgccgtggatcgatggagccggcctgacgccctatgcggcc
gcgcaattcaccacggtctatcttccgagctacggcgagacggccggaactgcgagcacg
ttcggcctcaactacgctgccagggacgttaccgcatcacgcagcgaactcggcctgcgt
agcgaccgctcgttcggtgctctcgatggcgtcatgacgttacgcggacgcgccgcatgg
gcgcataatttcaacccggatcgcagcgtcaacgccaccttccagacgctgcccggtgcc
ggcttcgtcgtcaacggggcagcccaggcgcgcgaagccgcgctggtgaccgcttctgcg
gagatggcgtggcgcaacggctggactgtggccggaaccttcgaaggcgagttctcgaag
gtgacgagcagctatgccggcaagggcgtggtgcgctacggctggtag
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