Rhodopseudomonas sp. BAL398: RBJ75_18670
Help
Entry
RBJ75_18670 CDS
T10316
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhol Rhodopseudomonas sp. BAL398
Pathway
rhol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBJ75_18670 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhol03019
]
RBJ75_18670 (recQ)
03400 DNA repair and recombination proteins [BR:
rhol03400
]
RBJ75_18670 (recQ)
Enzymes [BR:
rhol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBJ75_18670 (recQ)
Messenger RNA biogenesis [BR:
rhol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RBJ75_18670 (recQ)
DNA repair and recombination proteins [BR:
rhol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RBJ75_18670 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
zf-CXXC
Fic-like_C
Motif
Other DBs
NCBI-ProteinID:
WOK16180
LinkDB
All DBs
Position
3965742..3967595
Genome browser
AA seq
617 aa
AA seq
DB search
MNHPARRPDPDDDARALSVLNHVFGLPGFRGSQQQIVRHVTSGGNCLVLMPTGGGKSLCY
QLPSLLRAGCGIVVSPLIALMRDQVAGLLEAGVKAAVLNSSLSWDEANAVESQLLAGELD
LLYVAPERLLTPRCLAMLGRAKLALFAIDEAHCVSQWGHDFRPEYIGLSAIAEKFPEVPR
IALTATADDLTRREIVERLGLADAPQFVASFDRPNIRYEIVDKLSAPAQLKAFIEDRHAG
DAGIVYCLSRAKVDDTAATLTKFGIHALPYHAGLDAATRARNQDRFINEDGIVIVATVAF
GMGIDKPDVRFVAHLDLPKSIEAYYQETGRAGRDGKPSDAWMAYGLSDIVQQRRMIDESN
GAEAFKRVSIGKLDALVGLCETTHCRRDRLLGYFGEETTGANCGNCDNCLNPPKVWDGSV
ASQKLLSCAYRTGQRFGAMHLIDVLIGRLTDKVTQFGHDKLSVFGIGADLNEKQWRAVMR
QLVALGHLKPDSEAYGALTLTDSSRGVLKGETAVMLREQIVRARPPRATSRRGDLAPAAA
RGAGDPDLFARLKAWRSEVARTRGVPAYVVLHDATMDGIAAARPTTLAQLRGIAGIGDKK
LEHYGQELLALVNASGG
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatcccgcccgccgccccgatcccgatgacgacgctcgcgcgctgtcggtgctc
aaccacgtgttcggcctgccgggctttcgcggcagccagcaacagatcgtccgccacgtc
acatcgggcggcaattgcctggtgctgatgccgaccggcggcggcaaatcgctgtgctac
caattgccgtcgctgctgcgcgcgggctgcggcatcgtggtgtcgccgctgatcgccttg
atgcgcgaccaggtcgccggcctgctcgaggccggggtcaaggccgcggtgctgaattcg
tcgctgtcctgggacgaggccaatgcggtggagagccaattgctcgccggcgaattggac
ctgctctatgtcgcccccgaacggctgctgacgccgcgctgcctggcgatgctgggtcgc
gcgaaactcgcgctgtttgcgatcgacgaggcgcattgcgtgtcgcaatggggccacgac
ttccgcccggaatatatcgggctgtcggcgatcgccgagaaattccccgaggtgccgcgg
atcgcgctgaccgccaccgccgacgatctcacccgccgcgagatcgtcgagcggctcggg
ctcgccgacgcgccgcaattcgtcgccagtttcgatcgccccaatatccgctacgagatc
gtcgacaaactgagcgcgccggcgcagctcaaagccttcatcgaggaccgccatgccggc
gatgccggcatcgtctattgcctgtcgcgcgccaaggtcgacgacaccgccgcgaccctg
accaaattcggcatccacgcgctgccctatcacgccgggctcgacgccgccacgcgcgcc
cgcaaccaggaccgcttcatcaacgaggacggcatcgtcatcgtcgccaccgtggcgttc
ggcatgggcatcgacaagcccgatgtgcgcttcgtcgcccatctcgatctgccgaaaagc
atcgaggcctattaccaggagaccggccgcgccggccgcgacggcaagccgtccgacgcc
tggatggcctatggcttgagcgacatcgtgcagcagcgccgcatgatcgacgaatccaac
ggcgccgaagccttcaagcgggtgtcgatcggcaagctcgatgcgctggtcgggctgtgc
gagaccacgcattgccggcgcgaccgcctgctcggctatttcggcgaggagaccaccggg
gccaattgcggcaattgcgacaattgcctcaacccgccgaaggtctgggacggcagcgtc
gcgtcgcaaaagctgttgtcctgcgcctatcgcaccggccagcgcttcggcgccatgcat
ctgatcgacgtgctgatcggccggctcaccgacaaggtcacccagttcggccacgacaaa
ttgtcggtgttcggcatcggcgccgatctcaacgagaaacaatggcgcgcggtgatgcgg
caattggtggcgctgggccatctcaagccggacagcgaggcctatggggcgctgacgctg
accgatagttcgcgcggcgtgctgaagggcgagaccgcggtgatgctgcgcgagcagatc
gtccgcgcccgcccgccacgggcgacatcgcggcgcggcgatctggccccggctgctgcg
cgcggcgccggcgatccggatctgttcgcccggctgaaagcctggcgctcggaggtggcg
cgcacccgcggcgtgccggcctatgtggtgctgcacgacgccaccatggacggcatcgcc
gcggcgcggccgaccacactggcgcagctgcgcggcattgcgggcatcggcgacaagaag
ctggaacattatggccaggaattgctggctttggtaaatgcgtcgggcggctga
DBGET
integrated database retrieval system
