Rhodopseudomonas sp. BAL398: RBJ75_18770
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Entry
RBJ75_18770 CDS
T10316
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rhol Rhodopseudomonas sp. BAL398
Pathway
rhol03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBJ75_18770 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhol03400
]
RBJ75_18770 (mutM)
Enzymes [BR:
rhol01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
RBJ75_18770 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RBJ75_18770 (mutM)
DNA repair and recombination proteins [BR:
rhol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RBJ75_18770 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
WOK16197
LinkDB
All DBs
Position
complement(3988092..3989030)
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AA seq
312 aa
AA seq
DB search
MPELPEVETVRRGLQPVMEGFAFDSALARRANLRFAFQPDFVARLTGQTVTALSRRAKYL
LVDLSSGDVLLMHLGMSGSFRVFAEPGSLAAAVIPPGVLQPGMPQPGLTPGLFHHPRGAH
GTHDHVVFAMSSGAMIVFNDPRRFGFMKIFPRAAIADEPFLKGLGPEPLGNAFDAAMLAA
ACAGKNTSLKAALLDQRVVAGLGNIYVCEALYRAHLSPKRSAATLATRTGAPHPRAVRLV
DAIHQVLRAAIEAGGSSLRDHRQTSGELGYFQHSFQVYDREGEPCQSDGCAGTVKRFVQN
GRSTFWCPKCQR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgcccgaagtcgaaaccgtgcgtcgcggcctgcagccggtgatggagggc
tttgcgttcgacagcgcgctggcgcggcgcgccaatctgcgctttgcgttccagccggat
ttcgtcgcccggctcaccggccagaccgtcaccgcgctgtcgcggcgggcgaaatatctg
ctggtcgatctgtcgagcggcgacgtgctgctgatgcatctggggatgtcgggctcgttc
cgggtgttcgccgagccgggatcgctggcggcggccgtgattccgcccggggtgttgcag
ccggggatgccgcagccggggctgaccccggggctgtttcatcatccgcgcggcgcgcac
ggcacccatgatcatgtggtgttcgccatgtcgagcggcgccatgatcgtgttcaacgat
ccgcgccgcttcggcttcatgaagatcttcccgcgcgccgcgatcgccgacgagccgttc
ttgaaggggctggggccggagccgctcggcaatgcgttcgatgccgcgatgctggctgcg
gcctgcgccggcaagaacaccagcctgaaggccgcgctgctcgatcagcgcgttgtcgcg
gggctcggcaacatctatgtctgcgaggcgctgtatcgcgcgcatctgtcgccgaagcgg
tcggccgcgacgctggcgacgcggaccggcgcgccgcatccgcgcgccgtgcgcctggtc
gatgcgatccaccaggtgctgcgcgccgcgatcgaggccggcggctcgtcgctgcgcgac
caccgccagacctccggcgaactcggttacttccagcattcgttccaggtctatgaccgc
gaaggcgagccgtgccagagcgacggctgcgccggcaccgtgaaacgtttcgtgcagaac
ggccgctcgacattctggtgcccgaaatgccagcggtga
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