Rhodopseudomonas sp. BAL398: RBJ75_18875
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Entry
RBJ75_18875 CDS
T10316
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rhol Rhodopseudomonas sp. BAL398
Brite
KEGG Orthology (KO) [BR:
rhol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhol03032
]
RBJ75_18875
03036 Chromosome and associated proteins [BR:
rhol03036
]
RBJ75_18875
03400 DNA repair and recombination proteins [BR:
rhol03400
]
RBJ75_18875
DNA replication proteins [BR:
rhol03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RBJ75_18875
Chromosome and associated proteins [BR:
rhol03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
RBJ75_18875
DNA repair and recombination proteins [BR:
rhol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
RBJ75_18875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
WOK16216
LinkDB
All DBs
Position
complement(4014041..4014346)
Genome browser
AA seq
101 aa
AA seq
DB search
MIKSELVQRIAEHNPHLYQRDVENIVNAILDEIVAALARGDRVELRGFGAFSVKHRPARA
GRNPRTGAHVPVDQKSVPFFKTGKEMRERLNREQSAADAGA
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatcagaactcgttcagcgcatcgccgagcacaacccgcatctgtatcagcgg
gacgtggagaatatcgtcaatgcgattctcgacgagatcgtcgcggcgctggcgcggggc
gaccgggttgaactgcgcggcttcggcgcgttctcggtgaagcatcggcccgcgcgcgcc
ggccgcaatccgcgcaccggcgctcatgtgccggtcgaccagaagagcgtgccgttcttc
aagaccggcaaggaaatgcgcgaacggctgaaccgcgagcagagcgccgcagacgccggc
gcttag
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integrated database retrieval system
