Rhodopseudomonas sp. BAL398: RBJ75_20220
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Entry
RBJ75_20220 CDS
T10316
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhol Rhodopseudomonas sp. BAL398
Pathway
rhol03030
DNA replication
rhol03430
Mismatch repair
rhol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBJ75_20220 (dnaQ)
03430 Mismatch repair
RBJ75_20220 (dnaQ)
03440 Homologous recombination
RBJ75_20220 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhol03032
]
RBJ75_20220 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rhol03400
]
RBJ75_20220 (dnaQ)
Enzymes [BR:
rhol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBJ75_20220 (dnaQ)
DNA replication proteins [BR:
rhol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBJ75_20220 (dnaQ)
DNA repair and recombination proteins [BR:
rhol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBJ75_20220 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WOK16463
LinkDB
All DBs
Position
4285094..4285783
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AA seq
229 aa
AA seq
DB search
MREIVLDTETTGLDPLRGDRLVEIGCVEIFNRMPTGQTFHRYINPQRDMPAEAFAVHGLS
GEFLADKPLFADVVEEFLEFIGDTPLVIHNASFDIGFINAELARMSRPPIPRDRLVDTLT
LARRKHPGVSNRLDDLCSRYAVDNSRRTIHGALLDAELLAEVYIDLIGARQSQLILAETQ
ADRTIREGDAPRRQRVTPLAPRLSDEVVAAHRAFVATLGDKPIWTDYFG
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagatcgtcctcgataccgaaaccacaggcctcgacccgctgcgcggcgatcgc
ctggtcgagatcggctgcgtcgaaattttcaaccggatgccgaccggccagacctttcac
cgctacatcaatccgcaacgcgacatgccggccgaggccttcgcggtgcacggcctgtct
ggcgaatttctcgccgacaagccgctattcgccgatgtggtcgaggagttcctggaattc
atcggcgacacgccgctggtgatccacaacgcctcgttcgatatcggcttcatcaatgcc
gaactggcgcggatgtcgcgaccgccgattccgcgcgaccgcctggtcgacaccttgacg
ctggcgcgacgcaagcatcctggcgtgtccaatcggctcgacgatctgtgctcgcgctat
gcggtcgataattcgcgccgcaccatccatggcgcgctgctcgacgccgaattgctggcc
gaggtctatatcgacctgatcggagcgcggcagtcgcagctgattctcgccgagacccag
gccgaccgcacgatccgcgaaggcgatgcgccgcggcggcagcgcgtgacgccgctcgcg
ccgcggctcagcgatgaggtggtggccgcgcatcgggcgtttgtcgccacactgggcgac
aaaccgatctggaccgattatttcggctga
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