Rhodopseudomonas sp. BAL398: RBJ75_21630
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Entry
RBJ75_21630 CDS
T10316
Name
(GenBank) strawberry notch family protein
KO
K26273
protein strawberry notch
Organism
rhol Rhodopseudomonas sp. BAL398
Brite
KEGG Orthology (KO) [BR:
rhol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rhol03036
]
RBJ75_21630
Chromosome and associated proteins [BR:
rhol03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
RBJ75_21630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
WOK16718
LinkDB
All DBs
Position
complement(4576373..4580737)
Genome browser
AA seq
1454 aa
AA seq
DB search
MLYAPRPAASAASLPLAPERPVSAAILAAAGQLLPHLEQGRPVSAAILRIVMEQAFGASD
TTGAWDWKSAYEACEVATILFLRKYGTALFRKAESPAAALPMLAKVANLLPTHTRRSEES
QSFQQFSTPVPLGVAALIAAAVTPADRVMEPSAGTGLLAVLAEMAGGALVLNELADTRAD
LLSHLFPAIPVTRFDAAQIDDHLDARIVPSVILMNPPFSVMANVTGRMADAAYRHIASAL
ARLADGGRLVTITGASFAPDAPAWRAAFARLQEHGRVVFSAAIDGAVYAKHGTTIDTRLT
VIDKVPADDAAAFPASPGVAPDVATLIGWIGEHVPARLPVDPAVAATMASPAPAPRTIRG
YVARVAASSPARTVAEPEGVELAYDTVDWTPAEDGRITDAIYEEYGLQAIRIPGAQAHPT
KLVQSVAMASVAPPKPSYRPRLPANIVTDGLLSDAQLETVIYAGEAHSDFLAGSWTLDET
FDIVSAAPDDAPNAVRFRRGFMLGDGTGAGKGRQSAGIILDNWMQGRRKAVWISKSDNLL
EDAQRDWSALCMERLLVTPLSRFSQGNDIRLSEGVLFTTYATLRSDDRGSKLSRVKQIVE
WLGSDFDGVIIFDESHAMQNAAGGKGERGDVAASQQGRAGLRLQHALPNARVVYVSATGA
TTVHNLAYAQRLGLWGGEDFPFSTRAEFVEAIEDGGVAAMEVLARDLRSLGLYTARSLSY
DGVEYELVEHQLTPEQTRIYDAYAGAFAIIHNNLDAAMQAANITGDSGTLNRQAKSAARS
AFESAKQRFFGHLLTSMKTPTLIRSIEQDLADGHAAVIQIVSTGEALMERRLAEIPTEEW
NDVRVDITPREYVLDYLAHSFPVQLYEPFTDSEGNLSSRPVFRDGQPVESRDAVARRDRL
IERLASLPPVPGALDQIVQRFGTDVVAEVTGRSRRIVRKSGADSMTSPGGIDRLAVENRA
ASANLAETQAFMDDQKRILIFSDAGGTGRSYHADLSARNQRLRVHYLLEPGWKADAAIQG
LGRTNRTNQAQPPLFRPISTDVKAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDN
LESHYARDALRQLYLLLVRGKVEGCSLQMFEDATGLSLMDSTGIKDELPPITTFLNRLLA
LTIELQGVLFTAFERLLNAKIEGAIASGSYDVGLETLQAESFIVTDRRTIHVHPGTGAEA
RLLTITQRQRNRPVTLAEALDHLDDPGAKLLVNERSGRAAVQIPTTSIMLDDGEIERRVR
LIRPMEAHNIPIKMMDETHWVQAERIAFKAAWDVEAAEVPEYADSTIHVVSGLLLPIWKR
LPNESTRVYRLQTDDGERIVGRRVSSAWVAGALAAGTSTLTPDDAFMALMDGKTILDLTE
GLQLRRVRVMGANRIELSGFTDAMRDRLRAYGLFHEIISWKLRMFVPTDTTGAAILAKVL
ERYPVERVGEREAA
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgctttatgctccccgtcccgccgcctcggcggcttcgcttccgctcgcgccggaaagg
cccgtttccgccgcgatcctggccgccgccgggcaactccttccccatctggaacagggc
cggccagtcagcgccgcgatcctgcgcattgtcatggaacaggcctttggcgcctccgac
acgacgggcgcctgggactggaagtccgcctacgaggcctgcgaagtcgcgacgatcctg
ttcctgcgcaaatacggaaccgcgcttttccgcaaagccgagtctccggccgcagccctg
ccgatgctggcaaaggtcgccaaccttctacccacgcacacacggcgatcggaggaaagt
cagtccttccagcagttctcgacgccggtgcccctcggcgtggcggcactgatcgccgcc
gccgtcacgccggccgatcgcgtgatggagccatccgccggcactggccttctcgctgtc
ctggccgagatggccgggggcgcgctcgttctcaacgagctggccgacacccgggccgat
cttctgtcccacctctttcccgccattcccgtcacccgcttcgacgcggcccagatcgac
gatcatctcgacgcgcgcatcgtgcccagcgtcatcctgatgaacccgccgttctcggtg
atggcgaatgtaacgggccggatggctgacgccgcctatcgccatatcgcctcagcgctt
gcgcgcctggccgacggcggccgcctcgtgacgatcaccggagccagcttcgcgccggat
gcgccggcgtggcgggccgcattcgcccgcctgcaggaacacggccgcgtcgtgttcagc
gccgcgatcgacggcgcggtttatgccaagcatggcacgaccatcgacacccgcctgacc
gtcatcgacaaggttccggccgatgatgcggcggcgtttccggcttcgcctggcgtcgcg
cccgacgttgcgacgctcatcggatggatcggcgaacacgtcccagcgcggctgcctgtc
gatccggccgtggccgccaccatggcttcgcccgcgccggctccgcggaccattcgcggc
tacgtcgcccgcgtcgccgcctcatcgccggcccgcaccgtcgctgagcccgagggtgtc
gaactcgcttatgacaccgtggactggacgcccgccgaagacggccggatcaccgatgcg
atctatgaagaatacggattgcaggcgatccgtattcccggcgctcaggctcacccaacc
aagctcgtgcagtccgtggcgatggcctcggtcgcgccgcccaaaccgagctatcggccg
cgcctgcccgccaacatcgtcaccgacgggcttctctccgacgcacagctcgaaaccgtc
atctacgccggcgaggcgcattccgatttcctcgccggttcttggacgctcgacgagacc
ttcgacatcgtctcggccgcgcccgatgatgcaccgaacgccgtgcgtttccgcaggggc
ttcatgctcggtgacggcaccggcgccggcaagggccgccagtcggccggcatcatcctc
gacaactggatgcagggccggcgaaaggcggtgtggatatcgaagtccgacaacctgctg
gaagacgcccagcgcgactggtcggcgctctgcatggaacgcctgctggtcacgccgctg
tcgcgcttctcgcagggcaatgacatccgcctgtcggaaggcgtcctattcaccacctat
gccacgctacggtccgatgaccgcgggagtaagctttcgcgcgtcaagcagatcgtcgaa
tggttgggctccgacttcgatggagtaatcatcttcgacgagagccacgccatgcagaac
gccgctggcggcaagggcgaacgcggcgatgtcgccgcctcgcagcagggccgcgcgggc
ctacggctccagcacgccttgccgaatgcgcgcgtcgtctatgtctcggcgaccggcgcg
accaccgtccacaatctcgcctacgcccagcgcctcggcctctggggcggcgaggacttc
ccgttctccacccgcgccgaattcgtcgaggcgatcgaagatggcggcgtggcggcgatg
gaggtgttggcccgcgacctgcgctcgctcggcctctacacggcccggtcgctctcctat
gacggtgtcgaatacgagctggtcgagcaccagcttacccccgagcagacgcggatctac
gacgcctatgccggggccttcgccatcatccataacaatctcgacgccgcgatgcaggcc
gccaacatcaccggtgacagcggcacgctgaatcggcaggccaagtccgccgcccgctcc
gccttcgaatccgccaagcagcgcttcttcggtcatctgctgacctcgatgaagacgccg
accttgatccggtcgatcgagcaggacctggccgatggccacgccgcagtgatccagatc
gtttcgaccggcgaagccctgatggagcgtcggctcgcggagatcccgaccgaggaatgg
aacgacgtccgggtggacatcaccccgcgcgaatatgttctggattatctcgcccattcc
ttcccggtgcagctctacgagcccttcaccgacagcgagggcaatctgtcgtcgcggccg
gtgtttcgcgacggccagccggtcgaaagccgcgacgccgttgcccgtcgtgaccggctg
atcgagaggctcgcttcgctgccacccgtccccggcgcgctcgaccagatcgtccagcgc
ttcggcaccgatgtcgtagcagaggtgacgggacgttcgcgccgcatcgtccgcaagtcg
ggtgccgactccatgaccagccccggcggcatcgaccgcctcgccgtggagaaccgcgcc
gcctcggccaatctggcggagacgcaagccttcatggatgatcagaaacgcattctgatc
ttctccgacgccggcggcaccgggcgcagctaccacgccgatctgtcggcgcggaaccag
cgcctgcgcgtccactatctgctggagccgggctggaaggccgacgccgccattcagggc
ctgggccgcaccaaccggaccaaccaggcgcagccaccgctgttccggccgatctcgacg
gacgtgaaggcggaaaagcgctttctctcgaccatcgctcgccgcctcgacaccctgggc
gcgatcacgcgcggccagcgccagacgggcggtcaaggcctgttccggcccgaggacaat
ctggagagccactacgcccgcgacgccctgcggcagctctacctgctgctggtgcgcggc
aaggtcgaggggtgctcactccagatgttcgaggatgccacgggcctctcgctgatggat
tccaccggcatcaaggatgagttgccgcccatcacgacgttcctcaacaggttgctggcg
ctgaccatcgagcttcagggtgtcctgttcaccgcgttcgagcggctgctgaacgccaag
atcgaaggcgcaatcgcttcgggcagctacgacgtcgggctggagacgctgcaggccgag
agcttcatcgtcaccgaccgccgaacgatccacgttcatcctggcaccggggccgaggct
cggctgctgaccatcacccagcgccagcgaaaccgtcccgtgacgctggccgaggcgctc
gaccatctcgatgacccgggcgcgaagctgctggtcaacgagcgttcgggccgcgccgcc
gtgcagataccaaccaccagcatcatgctggacgatggcgagatcgaacggcgcgtgcgg
ctgatccggccgatggaggcgcacaacattcccatcaagatgatggacgagacccattgg
gtgcaggccgagcggatcgccttcaaagcggcctgggacgtcgaggccgccgaggtgccg
gagtatgccgatagcaccatccatgtcgtcagcgggctgttgctgccaatctggaagcgg
ctgccgaacgagtcgacgcgggtctatcgcctccagaccgacgacggcgagcgcatcgtc
ggccgccgcgtctcctccgcctgggtggccggcgcgctcgcggccggcacgtcaaccctg
acgcccgatgacgccttcatggcgctgatggacggcaagaccatcctcgatctgaccgag
ggtcttcagcttcgccgcgttcgggtcatgggcgccaaccgcatcgagctgtcgggcttc
accgacgccatgcgcgatcgcctgcgggcctatggcctgtttcatgagatcatctcgtgg
aagctgcggatgttcgtgccgaccgatacgaccggcgcggccatccttgccaaagtgctt
gagcgctacccggtcgagcgcgtcggcgagcgggaggcggcgtga
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