Rhodopseudomonas sp. BAL398: RBJ75_22075
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Entry
RBJ75_22075 CDS
T10316
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rhol Rhodopseudomonas sp. BAL398
Pathway
rhol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBJ75_22075 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhol03019
]
RBJ75_22075 (pnp)
03016 Transfer RNA biogenesis [BR:
rhol03016
]
RBJ75_22075 (pnp)
Enzymes [BR:
rhol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RBJ75_22075 (pnp)
Messenger RNA biogenesis [BR:
rhol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RBJ75_22075 (pnp)
Transfer RNA biogenesis [BR:
rhol03016
]
Prokaryotic type
tRNA degradation factors
RBJ75_22075 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
DUF5813
KH-I_KHDC4-BBP
S1_RRP5
OB_RRP5_4th
aRib
Motif
Other DBs
NCBI-ProteinID:
WOK16799
LinkDB
All DBs
Position
complement(4683761..4685917)
Genome browser
AA seq
718 aa
AA seq
DB search
MFNIHSVEIDWGGRPLRLETGKIARQADGAVLATYGETVVLATVVAAKTPREGVDFLPLT
VDYIEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSH
DMENDPDILALVASSAALTLSGAPFKGPIGAARVGFINDEYVLNPTLDEMVDTQLDLVVA
GTADAVLMVESEAKELNEDIMLGAVMFGHRHFQPVVQAIIELAEKAAKEPRDVKVVDESE
LEKEILGMIEPELRAAYAIPVKQDRYAAVGKAKEKVMAHYFPEGEEPKYDKLRIAGVFKH
LEAKIVRWNILDTGKRIDGRDSKTVRQIIAQVGVLPRAHGSALFTRGETQAMVVTTLGTG
EDEQYIDSLSGTYKEQFLLHYNFPPYSVGETGRMGGTKRREIGHGKLAWRAIHPVLPPHH
EFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTDQGITSLQMDIKIAGITEEIMKVALGQAKDGRIHILGEMSK
ALTNARAELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAKVNIDDDGTVKVAS
SDGESIKAAIKWIKSIASDPELNAIYDGTVVKVMEFGAFVNFFGAKDGLVHISQLASGRV
QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQTTGEDLEAKQKAEEAAPREAAGE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatattcattcagtcgagatcgattggggtggtcgtccgcttcggcttgagacc
ggcaagatcgcccgtcaggccgacggcgccgtgctcgccacctatggcgaaaccgtcgtg
ctcgccacggtcgtcgccgccaagacgccccgcgagggcgtcgacttcctgccgctgacc
gtcgactatatcgagaagacctacgcggccggccgcattcccggcggctatttcaagcgc
gaaggccgcccgaccgagaaggagaccttggtctcccgcctgatcgaccgcccgatccgt
ccgctgttcgtcgacggctggcgcaacgagacccaggtcatcgtcaccgtgctgtcgcac
gacatggagaacgacccggacattctcgctctggtcgcctcttcggccgcgctgactttg
tccggcgcgccgttcaagggcccgatcggcgccgcccgcgtcggcttcatcaacgacgaa
tacgtgctcaacccgacgctcgatgagatggtcgacacccagctcgacctggtcgtcgcc
ggcaccgccgacgcggtgctgatggtcgaatccgaagccaaggaactcaacgaagacatc
atgctgggcgcggtgatgttcggtcaccggcacttccagccggtggtgcaggcgatcatc
gaactcgccgagaaggccgccaaggagccgcgcgacgtcaaggtcgtcgacgagagcgag
ctcgagaaagagatcttgggcatgatcgagcccgagctgcgcgccgcctacgccattccg
gtcaagcaggatcgctacgcagcggtcggcaaggccaaggaaaaggtgatggcgcactac
ttcccggaaggtgaggagccgaaatacgacaagctccgcatcgccggcgtgttcaagcac
ctggaagccaagatcgttcgctggaacattcttgacaccggcaagcgcatcgacggccgc
gattccaagaccgtgcgccagatcatcgcccaggtcggcgtgctgccccgcgcccacggc
tcggcgctgttcacccgcggcgaaacccaggcgatggtggtgaccacgctcggcaccggc
gaggacgagcagtacatcgactcgctgtcagggacctacaaggagcagttcctgctgcac
tacaactttcctccctactcggtcggtgaaaccggacgcatgggcggcaccaagcgtcgc
gaaatcggccacggcaagctcgcctggcgcgcgatccatccggtgctgccgccgcatcac
gaattcccctacaccgtgcgcgtcgtctccgagatcaccgagtcgaacggctcgtcctcg
atggcgtcggtctgcggcgcctctctggcgctgatggacgctggcgtgccgctgaagcgg
ccgaccgcgggcatcgcgatgggcctgatcctggaaggcgagcgcttcgcggtgctgtcc
gacattctcggcgacgaggatcatctcggcgacatggacttcaaggtggcggggaccgat
cagggcatcacctcgctgcagatggacatcaagatcgccggcatcaccgaggagatcatg
aaggtcgcgctcggccaggccaaggacggccgcatccacattctgggtgagatgtcgaag
gccctgaccaacgcccgcgccgaactcggcgaatacgcgccgcggatcgagaccttcaag
atcgccaccgacaagatccgggaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgaaaagaccggcgccaaggtcaatatcgacgacgacggcaccgtcaaggtggcgtcc
tccgacggcgaatcgatcaaggcggcgatcaagtggatcaagtcgatcgcgtccgatccc
gagctcaacgcgatctatgacggcaccgtcgtcaaggtcatggagttcggcgccttcgtg
aacttcttcggcgccaaggacggcctggtccatatcagccagctcgcttcgggccgggtg
cagaagacctccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggcttc
gacgaccgcggcaagacccggctgtcgatgaaggtcgtcgaccagaccaccggcgaggat
ctcgaagccaagcagaaggccgaagaggccgcgccgcgcgaagccgccggcgagtaa
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