Romboutsia hominis: FRIFI_0727
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Entry
FRIFI_0727 CDS
T10242
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
rhom Romboutsia hominis
Pathway
rhom02020
Two-component system
rhom02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rhom00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FRIFI_0727
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FRIFI_0727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhom03021
]
FRIFI_0727
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
rhom02035
]
FRIFI_0727
Transcription machinery [BR:
rhom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FRIFI_0727
Bacterial motility proteins [BR:
rhom02035
]
Flagellar system
Flagellar assembly proteins
Stator
FRIFI_0727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_Tnp_1_2
UPF0122
pP_pnuc_2
DUF1959
HTH_23
DUF1492
PhyR_sigma-like
DUF2779
DUF3139
Motif
Other DBs
NCBI-ProteinID:
CEI72272
UniProt:
A0A2P2BPL4
LinkDB
All DBs
Position
1:786808..787521
Genome browser
AA seq
237 aa
AA seq
DB search
MNSHQQEELIISNMPLVKHIASKYYTSKMGMEYEDLVSYGVMGLIDATNKFDESRGVKFS
TYASIRISSYIIDEIRKYSPISRMYMSKIKEYNKAVEILQNKFFRKPTIDEIANHMGVSK
NEINDINVKMLDLNNVYLDNVIFDDENEVKLIDTLKEKEELSPTHLVEKDELQEIMAKAI
DTLNEKDRLVLSLYYYEELTLKEIGLILGVSESRVSQLNSRAIKNLKLAMKKLKYID
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaattcacatcaacaagaagaacttataattagtaatatgcctcttgttaagcatatt
gcatcaaaatactatacgagcaaaatgggaatggaatatgaagatttagttagttatgga
gtcatgggacttatagacgcaactaataagtttgatgaaagtagaggagtgaaattttca
acttatgcatctataagaatatcatcttatataattgatgaaataagaaaatactcacct
atatctagaatgtatatgagcaaaataaaagaatataataaggctgtagaaattttgcaa
aataaattttttagaaaaccaactatagatgaaatagcaaatcatatgggtgttagtaaa
aatgaaattaatgatataaatgtaaaaatgttagatttaaacaacgtatatcttgataat
gtaatttttgatgatgaaaatgaagttaagcttatagatactttaaaagaaaaagaagag
ttatctccgacacatttagttgaaaaagatgagctacaagaaataatggcaaaggctata
gatacccttaatgaaaaagataggcttgttttatctttatactattatgaggaattaaca
ttaaaagaaataggattaatattaggggtttctgagtctagagtatcccaattaaatagt
agagccataaagaatttaaagttagctatgaaaaagttaaaatatatagactaa
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