KEGG   Romboutsia hominis: FRIFI_2017
Entry
FRIFI_2017        CDS       T10242                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
rhom  Romboutsia hominis
Brite
KEGG Orthology (KO) [BR:rhom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rhom03016]
    FRIFI_2017
Enzymes [BR:rhom01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     FRIFI_2017
Transfer RNA biogenesis [BR:rhom03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    FRIFI_2017
 Prokaryotic type
    FRIFI_2017
SSDB
Motif
Pfam: TruB_N TruB_C_2 Shigella_OspC
Other DBs
NCBI-ProteinID: CEI73545
UniProt: A0A2P2BT47
LinkDB
Position
1:complement(2067267..2068175)
AA seq 302 aa
MNKIVNIIKPTGMTSHDVVSVVRKTLNIKKVGHTGTLDPDAAGVLPICIGKATKVSELIL
NKDKSYICELTLGITTDTYDSSGEIIDRVDNFNYTKEEIEKAFETQRGYIDQLPPMYSAL
KVNGKRMCDLVRSGRADEIKLKTRPVHIKKLEILSINDNKIMFYVMCSKGTYVRSICYDI
GQVLGCGGHMSFLLRTSSGKFNLENAITLEQLQEYKENNTLEEHLYDIDYVLSNFNSLSI
HPNARKYYVNGGIIDARRFTQKDFNENDEIVRVYCEGEFLGSGKLIKKGSEISVKSDKLF
IV
NT seq 909 nt   +upstreamnt  +downstreamnt
atgaacaaaatagtaaacataataaagcctacaggaatgacatctcatgatgttgttagt
gtagtaagaaaaaccttaaatataaagaaagttggacatacaggtacccttgacccagat
gcggcaggggtattacctatatgtataggaaaagcaactaaagtaagtgaacttatacta
aataaagataagagctatatttgtgaattaactcttggtataactacagacacttacgat
tcttcaggagagataatagatagagttgacaactttaactacactaaagaagaaatagaa
aaagcttttgaaactcaaagaggatatatagatcagttacctccaatgtattctgcactt
aaggtaaatggaaaaagaatgtgtgatttagttagaagcggaagagcagatgaaataaag
ctaaagactagaccagtgcatattaaaaaactagaaatacttagcataaatgacaataaa
ataatgttttatgtaatgtgttcaaagggaacttatgtcagaagtatatgttatgatata
ggacaagttctaggttgtggaggtcatatgtctttcttacttagaacatcttcaggtaaa
tttaatttagaaaatgctataactttagaacaattacaagaatacaaggaaaacaacact
ttagaagaacatttatatgacatagactacgtattatcaaactttaacagtctatctata
caccctaatgcaagaaagtattatgtaaatggtggaataatagatgcaagaagatttaca
caaaaagatttcaatgaaaatgatgaaattgtaagagtttactgtgaaggtgaattttta
ggtagtggtaaattaattaaaaaaggtagcgaaataagtgtaaagagtgataaactattt
atagtataa

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