Romboutsia hominis: FRIFI_2084
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Entry
FRIFI_2084 CDS
T10242
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacF
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rhom Romboutsia hominis
Pathway
rhom00550
Peptidoglycan biosynthesis
rhom01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhom00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FRIFI_2084
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhom01002
]
FRIFI_2084
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhom01011
]
FRIFI_2084
Enzymes [BR:
rhom01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FRIFI_2084
Peptidases and inhibitors [BR:
rhom01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
FRIFI_2084
Peptidoglycan biosynthesis and degradation proteins [BR:
rhom01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
FRIFI_2084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
CEI73612
UniProt:
A0A2P2BTF5
LinkDB
All DBs
Position
1:complement(2126839..2127987)
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AA seq
382 aa
AA seq
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MKKLASILVAFIMAIIPINTSFANDTGNINVSSKSAVLMDVGSGKVLYEKQAHEKLPPAS
VTKVMTMLLCMEALESGKLKLTDEVQISENASSMGGSQIFLEAGEVQDVDTLIKGIAVAS
ANDACVAMGEHIGGSVEGFVDMMNKKAKELGMKDTNFVNTNGLPVDNHYTTAYDIALMSR
ELLKHEAISKYLTTWMDKVVVGKKKVEVGLANTNKMVKHYQGTTGVKTGFTQQAKYCLSA
SAKRGNTHLIAVTLGAETSPERFKDSSNLLNYGFANYESVNLCTKDDKIANIKIDKAEDE
NIELVAKDDLSLLIKKGGNKNFERKVKLNENLKLPIKKGSVLGQMEIYQNKKSIGKVDLV
NNKDINKAGYMKMLQRVIENMF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctagctagtatattagttgcatttataatggctattatacctattaataca
agttttgcaaatgatacgggaaacataaatgtatcctcaaaatccgcagtacttatggat
gtaggtagcggaaaagttttatatgaaaaacaagcacatgaaaagttgccaccagctagt
gtaacaaaagtaatgactatgcttttatgtatggaagcactagaaagtggtaagctaaaa
ttaacagatgaagtgcaaataagtgaaaatgcatctagtatgggtggaagtcagatattt
ttagaagctggagaagtacaagatgtagatacgttaataaaaggtatagcagtagcatca
gcaaatgatgcttgtgtagctatgggagaacatattggaggaagtgtagaaggctttgta
gatatgatgaataaaaaggctaaagaattaggtatgaaggatactaactttgtaaacact
aatggtcttccagttgataatcactacactactgcttatgatatagctttaatgtctaga
gagttattaaagcatgaagctataagtaagtaccttacaacttggatggacaaggttgta
gtaggaaagaaaaaggtagaagtaggacttgctaatactaataagatggtaaaacactat
caaggtacaacaggtgttaaaacaggatttacacaacaagcaaaatattgtttatctgca
tcagctaaaagaggaaatactcatttaatagcagtaacattaggtgcagaaacttcacca
gaaagatttaaagattcttctaacttactaaactatggatttgcaaattatgaaagtgtt
aatctttgtacaaaagatgataaaatagcaaacataaagatagataaagctgaagatgaa
aatatagaattagttgcaaaagatgatttaagccttttaatcaaaaagggtggaaataaa
aactttgaaagaaaagttaagttaaatgaaaacctaaaacttcctatcaaaaagggaagt
gtacttggacagatggaaatatatcaaaataaaaagtctatagggaaagtggacttagta
aataataaagatataaataaagctggatatatgaaaatgctacaaagggttatagaaaac
atgttttaa
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