Romboutsia hominis: FRIFI_2107
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Entry
FRIFI_2107 CDS
T10242
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rhom Romboutsia hominis
Brite
KEGG Orthology (KO) [BR:
rhom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhom03032
]
FRIFI_2107
03400 DNA repair and recombination proteins [BR:
rhom03400
]
FRIFI_2107
Enzymes [BR:
rhom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FRIFI_2107
DNA replication proteins [BR:
rhom03032
]
Prokaryotic type
DNA Topoisomerases
FRIFI_2107
DNA repair and recombination proteins [BR:
rhom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FRIFI_2107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
CEI73635
UniProt:
A0A2P2BTD7
LinkDB
All DBs
Position
1:complement(2149303..2151411)
Genome browser
AA seq
702 aa
AA seq
DB search
MAKTLVIVESPAKAKTIEKFLGKSHYTVKASVGHVRDLPKSKLGVDIENDFDPQYINIRG
KGDVIKELKKEAKKSKKVYLATDPDREGEAISWHLAHILNLDENEQCRIEFNEITKDAIK
KAIKSPRNIDLSLVDAQQARRVLDRLLGYQISPILWQKIRKGLSAGRVQSVTTKLICDRE
KEINAFIPKEYWTLELNAKTEKNEDINLKFHSKKNEKIEIENEEMINNILDDIKGKKLNV
VSIESKSRRKSAPKPFTTSMLQQEAANKLSFTTKKTMSIAQELYEGIDIEKETVGLISYI
RTDSKRISEEAKEKAKDYILGEIGENYYKNVEDKKDKKESKKVQDAHEAIRPTYVEKTPN
SIKEYLTKDQFKLYNLIWRRFVASQMEDSVFDILNVECKIDDYIFKATGSKLKFDGYTKI
YNFTDREDKILPTINEGDILDIEDIIPTQHFTQPPARFTEASLVKTLEELGIGRPSTYAP
TIATILNREYVEKQGTSLHPTELGIIVTDILEKNFQKFIDADFTAQMESKLDEIEEGHMK
WKDVVRESYEPLKEAIEIAKESIEKINMDEETDEVCENCGEKMFIKYGRFGKFIACKNYP
ECKTTKPLVNKIGVKCPKCHEGDIILRKSKRGKAFYGCSRYPECDFVAWNKPTGELCSEC
GSYMVEKVTKGETKVVCSNKDCKNLNNKENDNIKPVNENSEN
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaacattagtcatcgttgagtcgcctgctaaagctaaaacgatagagaaattt
ttagggaagagccattatacagtaaaagcttcggtcggtcatgtaagagatttacctaaa
agtaaattaggtgtagatatagaaaatgactttgatcctcaatatataaatataagagga
aaaggcgacgtaataaaggaacttaaaaaggaagctaaaaaatctaagaaagtatattta
gcaaccgaccctgatagagagggtgaagctatatcttggcatttagctcatatattaaat
ctagatgaaaatgaacagtgtagaatagaatttaatgagataactaaagatgcaataaaa
aaagctataaagagtcctagaaatattgacttaagtctagtagatgcacaacaagctaga
agggttttagataggcttttgggttatcaaataagcccaatactttggcaaaaaataaga
aaaggtcttagtgcaggtagagttcaatcagtaacgacaaaattaatatgcgacagagaa
aaagaaataaatgcatttataccaaaagaatattggacattagagctaaatgcaaaaaca
gaaaaaaatgaagatattaatttaaaatttcattcaaagaaaaatgagaagatagaaatt
gaaaatgaagagatgataaataacatcttagatgatataaaaggtaagaaattgaatgta
gtatcaatagaatctaagagtagaagaaaatcagcgccaaagccatttactactagtatg
cttcaacaagaagctgcaaataaactatcttttacaactaaaaaaactatgagtatagca
caagagttgtatgaaggtatagatatagaaaaagaaactgtcggtcttatatcatatata
agaacagattctaagagaatatcagaagaagctaaagaaaaggctaaggattatatccta
ggtgaaataggagaaaactactataaaaatgtagaagacaagaaagataaaaaagaaagt
aaaaaagttcaggatgcacatgaagctataagacctacatatgtagaaaagactccaaat
agtataaaagaatatcttactaaagatcaatttaagttatataacttaatatggagaaga
tttgttgcaagtcaaatggaagactctgtatttgatatattaaatgtagagtgtaagata
gatgattatatatttaaagctacaggatcaaaattaaaatttgatggatatacaaaaata
tataattttactgacagagaagataaaatattaccaactataaatgaaggtgacatatta
gatatagaagatataataccaactcaacactttactcagccacctgctagatttacagag
gcaagtttagtaaagactttagaagagttaggtataggtagaccaagtacatatgcgcct
actatagcaactatactaaatagagaatatgttgaaaaacaaggtacaagtttacatcct
acagaattagggataatagtcacagatatactagaaaaaaacttccaaaagtttatagat
gctgattttactgctcaaatggagagtaagctagatgaaatagaagaaggtcatatgaag
tggaaagatgtagttagagaatcatatgaaccactaaaagaagctatagaaatagctaaa
gaaagtatagaaaaaataaacatggatgaggaaacagatgaagtatgtgaaaactgtgga
gaaaagatgtttataaaatacggtagatttggaaagtttatagcatgtaaaaactatccg
gaatgtaaaacgacaaaaccactagttaataaaataggcgtaaaatgtcctaagtgtcat
gaaggagatatcattcttagaaaatctaaaagagggaaagcattttatggttgttctagg
tatccagagtgtgactttgtagcatggaataaaccaacaggagaattatgttcagaatgt
gggtcatatatggtagaaaaggtcacaaagggtgaaactaaagttgtatgttctaataaa
gattgtaagaatttaaataataaagaaaacgataatataaaaccagtgaatgaaaatagc
gaaaattag
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