Romboutsia hominis: FRIFI_2562
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Entry
FRIFI_2562 CDS
T10242
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhom Romboutsia hominis
Pathway
rhom03420
Nucleotide excision repair
rhom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FRIFI_2562
03430 Mismatch repair
FRIFI_2562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhom03400
]
FRIFI_2562
Enzymes [BR:
rhom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FRIFI_2562
DNA repair and recombination proteins [BR:
rhom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FRIFI_2562
MMR (mismatch excision repair)
Other MMR factors
FRIFI_2562
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_22
DUF3553
ResIII
DEAD
DNA_binding_1
Motif
Other DBs
NCBI-ProteinID:
CEI74085
UniProt:
A0A2P2BUP2
LinkDB
All DBs
Position
1:complement(2637016..2639238)
Genome browser
AA seq
740 aa
AA seq
DB search
MNLDTLNPAQREAVEKTEGPVLILAGAGSGKTRVLTTRIAHLIEDKGVQAPNILAITFTN
KAANEMRERVEETLGTDTKEMWISTFHSCCVRILRKDINRIGYNRSFVIYDSADQVTLVK
DCLKELNLSDKVFEPKVIISTISGAKDKLYSPSQFKDMHRHDNRMSKIADVYALYQDRLK
RNSALDFDDLIYKTVELLKSEEEVLEFYRSRFKYIMVDEYQDTSKAQYELIKLLAKEHQN
ICVVGDDDQSIYGWRGADIRNILEFERDYDDVHVVKLEQNYRSTQVILDAANTVISNNIE
RKRKKLWSEKKEGELIKIQLSENEINESDFVADMIAKIAREQGRTYKDFAVLYRANAQAR
PVEDALNRSQIPYNIYGGTKFYERKEIKDLLAYLRVIQNPQDDISLKRIINVPRRGIGLR
TIEKIEDRASLKQESMYSVLIDIDTNSDISTKAKNSINGFVDTVGTLRTIKEVYPVSKLI
EKVLETTGYIDELSKDKSEEAQDRIDNLKEFISIALEFEQSSEEKDLQTFLTGVALSSES
SEDEEIEKVSLMTIHTSKGLEFPVVFLIGMEEGLFPISRAVRSMSESDIEEERRLCYVGI
TRAKEVLYMTLTQRRTLYGKTNPSIASRFMEELPEQCIEKLNKVEKELTYSKANYNVLDK
YKQKYMNTMNKSTVAKKVNATIKDTKKETDIDDIKLGAKVHHPKFGEGTVVGMMGSDVTI
AFKEQGIKKINKEYTTLDVL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagatacattaaatcctgcccagagagaagctgtagaaaaaacagaaggaccg
gtacttatactagctggagctgggtcagggaaaactagagttttaacaacgagaatagca
catcttatagaagataaaggtgtacaagccccaaatatattagcaataacatttacaaat
aaagctgctaatgaaatgagagagagagtagaggaaactttaggaacagatacaaaggaa
atgtggataagtactttccactcttgctgtgtgcgtatactaagaaaagatataaataga
atcggatacaatagaagttttgttatatatgatagtgctgaccaagttaccttagtaaag
gactgtttaaaagagttaaatttaagtgataaagtatttgaacctaaggtaataataagt
acaatatcaggggcaaaagataagctgtatagcccatcacaatttaaagatatgcataga
catgataatagaatgagtaagattgcagatgtatatgcactatatcaagatcgtttaaaa
agaaatagtgctttagattttgatgatttaatatataaaacagtagaacttttaaaatct
gaagaagaagttttagaattttatagaagtagatttaaatatataatggtagatgagtat
caagatacaagtaaagctcaatatgaactaataaaattattagcaaaggaacatcaaaat
atatgtgttgttggagatgatgaccaaagtatatatggatggagaggtgcggatataaga
aatatacttgagtttgaaagagactatgatgatgttcatgttgttaagctagaacaaaac
tatagatctactcaagttatactagatgcagcaaatactgttatatctaataatatagaa
agaaaaagaaagaaactttggagtgagaaaaaagaaggagagctaataaagatacaacta
tctgaaaatgaaataaatgaatctgattttgttgcagatatgatagctaaaatagcaaga
gagcaaggtagaacttataaggactttgctgtactttatagagctaatgctcaggctcgt
ccagtagaagatgcacttaatagaagccaaataccatataatatatatggtggaacaaaa
ttctatgaaagaaaagaaataaaagatttactagcatatttaagggttatacaaaatcct
caagatgatatatctttaaagaggataataaacgtacctagaagaggtataggtcttaga
actatagaaaaaatagaagatagagctagtttaaagcaagagagtatgtactctgtacta
atagatatagatacaaattcagatatatcaacaaaagctaaaaatagtataaatggattt
gttgatacagtaggaacacttagaactataaaagaagtatatcctgtaagtaagcttata
gagaaagtattagagactacaggatatatagatgagctatctaaggacaaaagtgaagaa
gctcaagatagaattgataatctaaaagagtttatatctatagcattagaatttgagcaa
agtagcgaagaaaaagatttacaaacattcttaacaggtgttgcactttcatctgaatct
agtgaagatgaagagatagaaaaagtatcattaatgactatacacacatcaaaagggcta
gaattccctgttgtattcttaattggtatggaagagggattattcccaatatctagagct
gtaaggtcaatgagtgagtcagatatagaagaagaaagaagactttgctatgttggtata
acaagagcaaaagaagttctttatatgacattaactcaaagaagaactttatatggaaaa
actaatccatcaatagcatctagatttatggaagaattaccagaacaatgtatagagaag
cttaacaaagtagaaaaagaattaacttactcaaaggctaattataatgtattagataag
tacaaacaaaaatatatgaacactatgaataagtccacagttgctaaaaaagtaaatgcg
actataaaagatactaaaaaagaaactgatatagatgatataaagctaggagcaaaggta
catcatccaaaatttggagaaggtactgttgttggtatgatgggctctgatgttacaata
gcatttaaagaacaaggaattaaaaaaataaataaagaatacacaacattagatgtatta
tag
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