Rhodococcus sp. NJ-530: EHW12_11710
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Entry
EHW12_11710 CDS
T11349
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
rhon Rhodococcus sp. NJ-530
Pathway
rhon00190
Oxidative phosphorylation
rhon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhon00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
EHW12_11710
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHW12_11710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhon03019
]
EHW12_11710
Enzymes [BR:
rhon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
EHW12_11710
Messenger RNA biogenesis [BR:
rhon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EHW12_11710
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Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
AZI61754
LinkDB
All DBs
Position
complement(2508511..2510754)
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AA seq
747 aa
AA seq
DB search
MSNGEALENRISEDQSDGDHSSGRHENGAATSPRSQAVAVATNIPGAPPAATKAELPELL
VGLPEDRYLNRELSWLDFNARVLALAADESLPLLERAKFLAIFASNLDEFFMVRVAGLKR
RDETGLSVRSADGLSPREQLALIARRTQELADKHAHVFLDSVRPALAAEGISIVRWADLS
ADDHGRLSAHFHEQVFPVLTPLAVDHAHPFPYISGLSLNLAVTVKDSVTRGEHFARVKVP
DNVGRFVRVKSTTSSSTIDSFLPMEELISAHLDVLFPGMEIVEHHAFRITRNADFEVEED
RDEDLLQALERELARRRFGSPVRLEVADDMTEHMLELLLRELDVDPADVIEVSGLLDLSC
LWQVYAVDRPALKDAPFVPATHPAFGERETPKSVFSTLREGDVLVHHPYDSFSTSVQRFI
EQAAADPQVLAIKQTLYRTSGDSPIVNALIDAAEAGKQVVALVEIKARFDEQANIKWARK
LEQAGVHVVYGLVGLKTHCKTCLVVRREGSTIRRYCHIGTGNYNPKTARMYEDVGLLTAA
PEIGADLTDLFNSLTGYSRKTSYRNLLVAPYGVRRGIIERIDNEIAHKLAGRDAGIRLKA
NALVDEQVIDALYRASKAGIPVEIVVRGICALKPGVPGLSENIEVRSILGRFLEHSRMFH
FRSADEFWIGSADMMHRNLDRRVEVMVQVKDPKLSKQLGDIFDSALDPRTRCWVLHPDGS
WVAAPERGEDVREHQQSLMRSRTASGS
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaatggcgaagcactcgaaaaccgtatttccgaagaccagtcggacggagaccac
agctccggccggcacgagaacggcgcggccacctcgccgcgatctcaggccgtcgcggtc
gccaccaacatcccgggcgctccccctgcagctaccaaggcagagctacccgaattgctc
gtcggacttcccgaggatcgttacctcaaccgcgaactcagctggctcgatttcaatgcc
cgtgttctcgcattggctgccgacgagtcactgccgttgctcgaacgcgcaaagttcctc
gccatcttcgcttccaatctcgacgaatttttcatggtccgggtcgccggactcaagcgc
cgcgacgagacgggactgtcggtcaggtccgccgacggcctctccccacgcgaacaattg
gcgctcatcgcgcgtcgcacccaggaactcgctgacaagcacgcacacgtgtttctcgac
tcggtccgccctgccctggcggcagaaggcatttcaattgttcgatgggccgacctcagt
gccgacgatcacggccggctctcggcgcatttccacgagcaggtcttcccggtactgacg
ccgttggcagtcgatcacgcccacccgttcccctacatcagcggactgagcctcaacctc
gccgtgacagtgaaggactccgtcacccgcggcgaacacttcgctcgcgtcaaggttccc
gacaacgtcggccggttcgtgcgagtcaagagcacgacatcttcgtccaccatcgattct
ttcctcccgatggaagaactgatttcggctcatctggacgtgctgttccccggaatggaa
atcgtcgaacatcacgctttccgaatcacacgcaacgccgatttcgaggtcgaagaagat
cgggacgaggatctgctgcaggcactcgaacgtgaattggcgcgtcgtcgtttcggttca
cccgttcgcctcgaagttgccgacgacatgaccgagcacatgctcgaactgcttctgcgt
gaactcgacgtcgatccggccgacgtgatcgaggtttccggtctcctcgacttgtcctgc
ctctggcaggtttacgccgtcgaccgccccgctctcaaagacgctccgttcgtcccggcg
acgcatccggcgttcggtgaacgcgagactccgaagagcgtgttctcgaccctgcgcgaa
ggcgacgtgctcgtccaccacccatacgactcgttttccacaagcgttcaacgcttcatc
gaacaggccgccgccgacccgcaggtgctcgcgatcaagcagaccctgtaccgcacttcc
ggcgactcccccatcgtcaatgcactgatcgacgccgccgaagcgggcaagcaggttgtc
gcgctggtggagatcaaggcccgcttcgacgagcaggccaacatcaagtgggcacgcaaa
ctcgagcaggccggcgttcacgtcgtctacggtctcgtcggtctcaagactcactgcaag
acgtgcctcgtcgtcagacgagagggctcgaccattcgtcgttactgccacatcggcacg
ggcaactacaacccgaagaccgcgcgcatgtacgaggacgtcggattgctcaccgcagca
ccggagatcggtgcagacctcaccgacctcttcaactcgctgaccggatactcccgaaag
acgagctaccgcaaccttctcgtagcgccgtacggggttcgccgcgggatcatcgagcgg
atcgacaacgagatcgctcacaagctcgcaggccgcgatgccggtatccgcttgaaggcc
aacgcattggtcgacgagcaggtcatcgacgcgttgtaccgcgcatccaaggccggtatc
cccgtcgagatcgtggtccgcggaatctgcgcgctcaagccgggcgttcccggcctcagc
gaaaacatcgaagtacgttccattctcggacgcttcctcgaacactcgcgaatgttccat
ttccgctcggccgacgaattctggatcggcagcgcagacatgatgcaccgcaacctcgat
cgccgcgtcgaggtcatggtgcaggtcaaggacccgaaactgtcgaagcaactcggtgac
atcttcgactccgcgctcgatccccgaactcgctgctgggtactgcatccggacgggagt
tgggtcgctgcccccgaacgcggtgaggacgtacgtgagcatcaacagtcgttgatgcgc
agccgcaccgccagcgggtcttga
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