Rhodococcus sp. NJ-530: EHW12_19080
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Entry
EHW12_19080 CDS
T11349
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rhon Rhodococcus sp. NJ-530
Pathway
rhon03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rhon00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EHW12_19080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhon03019
]
EHW12_19080
03009 Ribosome biogenesis [BR:
rhon03009
]
EHW12_19080
Messenger RNA biogenesis [BR:
rhon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EHW12_19080
Ribosome biogenesis [BR:
rhon03009
]
Eukaryotic type
Pre-60S particles
RNases
EHW12_19080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF362
Motif
Other DBs
NCBI-ProteinID:
AZI63034
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Position
4096162..4096761
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AA seq
199 aa
AA seq
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MQDKLVWIDCEMTGLRLESDKLIEIAALVTDSDLNILGEGVDIVIHADDDALAAMPDVVK
KMHAKSGLTEEVRKSTVTLAEAEKEVLAYIRKHVPVAGTAPLAGNSIATDRGFISRDMTA
LDTYLHYRMIDVSSIKELSRRWYPRIYFGQPEKGLAHRALADIKESIRELKYYRGTAFVA
APGPSSAEIAAVVEGLGPA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggacaaattggtatggatcgattgcgaaatgaccgggctgcgactcgagtcggac
aaactcatcgagattgcggctctggtgaccgacagcgacttgaacatcttgggcgaaggt
gtggacatcgtcatccacgccgacgacgacgcgttggctgcaatgcccgacgtcgtgaag
aagatgcacgcaaagtcgggactgaccgaagaggttcgtaagtcgacggtcaccctcgcc
gaggcggagaaagaggtgctcgcgtacatccgcaagcacgttcccgtcgccggtacggct
cccttggcgggtaattcaatcgccaccgaccgcggattcatctcacgggacatgacggca
ctggacacatacctgcactaccggatgatcgacgtcagctccatcaaagaactctcccgc
cgctggtacccgcgaatctacttcggccagcccgaaaaaggtctcgcccaccgggcactc
gccgacatcaaggaatccatccgcgaactcaagtactaccgcggcactgcattcgtcgcg
gcgcccggaccgtcgagcgcggagatcgcagccgtcgtagagggcttgggtcccgcctga
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