Rhodococcus sp. NJ-530: EHW12_20995
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Entry
EHW12_20995 CDS
T11349
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rhon Rhodococcus sp. NJ-530
Brite
KEGG Orthology (KO) [BR:
rhon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhon03400
]
EHW12_20995
DNA repair and recombination proteins [BR:
rhon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EHW12_20995
Archaeal homologous recombinant proteins
EHW12_20995
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AZI63353
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Position
complement(4540877..4543855)
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AA seq
992 aa
AA seq
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MRLHKLEVSSFGPFADTVEVDFDRLGADGLFLLHGDTGAGKTTILDAVAFALYGRVPGAR
NESKRLLSDHAPAGSVPRVELEATISGRRIKLVRSPEYSRPKKRGTGSITENAKATLTWL
DGRGENLSRIPDIGDEINRLMGMSADQFFQVVLLPQGEFAKFLRAESDERGKLLERLFDT
KRFVSVEAWFDAKRKASATALAAREQSVRLLLAKVETAAGLEVGAEAHPLEWSRKLLAEA
QDTRDTSLAELVTAKDAAAEANRVLSAAQRTADLVARRNRATAELAAFNTGAAQRAVIGA
ELETAKRALPVAAVAGDVDAAGLHLAAALESMTAAMSTYSATGGPEIFVPEVWPPTDDER
QRVVARIRTWRDEIVRLDAMAEDARRADAAEAEIEKLGVRRDALSERIDAIAVERTQLPE
MVRSAGQRLEDAQRAHAALPGLEAALAKASDAAAAAHEFVSLRAQAEKIRVQVLDARDAH
QSARGRWLDLVQKRIEGMAAELASSLAPGDPCQVCGSREHPAPAQSDVVTVTESDLEVAS
AAERAAEKALSKVVDRQVTVDRDIDRVIARGGDGDVAELDRLRAAARNAVDEATHSAGQV
GGLADKLGHLNERDGELQQESASLTAELAALTERTTTLSATVEQIRAAIVAAVGEDSTIA
ARRSWFERIASAASAASEMRDDAVRAQARSAELSTKLAAAAAAAGFDSVEAAIEGVRSPA
RIAAIETELAKARDLEVAARTVLDDPEVVAVSEVETVDVDGPRERALRCAEVVNSAVAAA
SLAENRVSDLERFSGQLEKAYEAVAPERELHDELAALADVIAGKGQNSRKMSLRAYVLAS
RLEEIAVSASVRLQRMSGGRYEFVHSDEAGSRGRRGGLGLDIRDDFTGVVRSAKTLSGGE
SFLASLSLALGLADVVAAESGGIVLDTMFIDEGFGTLDADTLDSVMAVLDELRDGGRVVG
IVSHVDEMRQRIPSRLHVIRGRAGSSVKVIAD
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctgcacaaactcgaagtcagctctttcgggcccttcgccgacacggtcgaggtc
gacttcgaccgtttgggtgcagacgggctgttccttctgcacggtgacaccggggcaggc
aagaccacgatcctcgacgcggttgcgtttgccctgtacgggcgggtgccgggtgcgcgc
aacgagagcaaacggctactgtccgatcacgcgcccgccggttcggtgccgcgcgtggaa
ctcgaagcgaccatcagtggtcgcagaatcaaacttgttcgcagtccagagtattcgcgc
ccgaagaagcgtggcaccggttcgatcacagagaacgcaaaggccacactgacgtggttg
gacggccgcggcgaaaacctttcgcgcatccctgacatcggtgacgagatcaaccgcctc
atgggcatgagcgctgatcagttcttccaggtggtgctcttgccgcagggtgagttcgcc
aaattcctgcgtgccgagagcgacgagcgaggcaaactgctcgagcgtctgttcgacacc
aagcgttttgtctccgtcgaggcatggttcgacgccaagcgaaaggcaagtgcgaccgcg
ctcgcggccagggagcaatccgtgcgactactgctcgcgaaggtcgagacagctgcggga
ctcgaggtaggcgccgaggcacacccactggaatggtcgcgcaaactcctcgccgaggct
caggacacccgcgatacaagtcttgcggagctggtgaccgcgaaagatgcagcagccgag
gctaatcgggttctgtcggcggcgcagcgaaccgcagatctggtcgctcgccgtaatcgt
gcgaccgctgaactcgcagcattcaatacgggcgccgcccaaagagctgtgatcggcgct
gaactcgagaccgccaagcgcgcactgccggtggccgctgtcgccggcgatgtggacgct
gccggcttgcacctcgctgccgcactcgaatcgatgaccgcagcgatgtcgacctactcc
gcaacgggcggtccggagatttttgtgccggaggtgtggccacccaccgacgacgagcgt
caacgcgtcgtagctcggatccggacctggcgtgacgagatcgttcgcctggacgcaatg
gcggaggacgctcgcagagccgatgcggcagaagccgagatcgagaaactcggagttcgg
cgagacgctctgtccgagcgcatcgatgccatcgcggttgaacgcactcaactgccagaa
atggtgcgctcggccggccaacgactggaggatgcgcaacgcgcgcacgcggctctgccc
ggcctcgaagctgcactggccaaagcatcggatgctgcggcagcggctcatgaattcgtc
tctctgcgtgcgcaagccgagaagattcgtgtgcaggtgttggatgcgcgcgacgcccat
cagagtgctcgcgggcgctggctcgacctcgtgcagaagcgtatcgagggcatggctgcg
gagttggcgagttcactcgcgcccggtgacccatgccaggtgtgtggttcgcgtgaacac
cctgcgccggcgcagtctgatgtcgtgacggtcaccgagtccgatctggaagtcgcgtcc
gcagccgagcgtgcggccgagaaagccctgagcaaggtagtcgaccgccaggtaaccgtc
gaccgtgacatcgaccgggtgatcgcccgcggcggggacggcgacgtcgcagaactcgac
aggctccgcgccgcggctcggaacgccgttgacgaggcgacccactctgccggtcaggtt
ggagggttggccgacaagctcgggcatctcaacgagcgtgacggcgagctgcaacaggaa
tccgcttctctgacggccgaattggcggcactgaccgagcgtacgacgactctgtcggcc
acggtcgagcagattcgagcggcgatcgtcgctgcggtgggagaagattcgaccatcgct
gctcggcgctcgtggttcgaaaggattgcctccgctgcctcggcggcgtctgagatgcgt
gacgacgccgttcgtgcgcaggcgcgatcggcggaactgtcgaccaaactggccgctgcg
gcggccgctgctggattcgattcggtcgaggctgcgatcgaaggggtgagatcgccggcc
cgaatcgcggcgatcgaaacggaactcgccaaagcacgcgacctcgaggtggccgctcgg
acggtcctcgacgaccccgaggtcgttgcggtgagcgaagtcgagacagtcgacgtcgac
ggtcctcgcgagcgtgctcttcggtgcgccgaggtggtgaactcggctgttgcagctgct
tccctggccgagaaccgtgtgtcggatctcgaacggttcagcggacaactcgagaaggca
tacgaagcggttgcacctgagcgtgaactgcacgacgaactcgcggcgcttgccgacgtg
atcgccggcaaaggtcagaacagtcgcaagatgtcgctgcgagcgtatgtgctcgcgtcg
cggttggaagagatcgccgtgtcggcatcggttcggctgcagcggatgtccgggggcaga
tacgagttcgtgcacagtgacgaggcaggttctcggggtcgccgcggcggtctgggactc
gacatccgggacgacttcacgggtgtggttcgctcggcgaagacgctctcgggcggtgaa
tcattcttggcgtcattgtctttggccctcggacttgccgatgtggttgcggcggagtcc
ggcggaatcgttctcgacacgatgttcatcgacgaaggattcggcactctcgacgccgac
accctcgactcggtgatggctgtgttggacgagcttcgcgacggtggacgagtggtgggc
atcgtcagtcacgtggacgagatgaggcagcgaatcccgagtcgcctgcacgtcattcgc
ggacgtgcaggctcctcggtgaaggtgatcgcggactga
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