Rhodococcus sp. NJ-530: EHW12_22020
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Entry
EHW12_22020 CDS
T11349
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhon Rhodococcus sp. NJ-530
Pathway
rhon03420
Nucleotide excision repair
rhon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EHW12_22020 (pcrA)
03430 Mismatch repair
EHW12_22020 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhon03400
]
EHW12_22020 (pcrA)
Enzymes [BR:
rhon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EHW12_22020 (pcrA)
DNA repair and recombination proteins [BR:
rhon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EHW12_22020 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
EHW12_22020 (pcrA)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AZI63535
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Position
complement(4758427..4760919)
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AA seq
830 aa
AA seq
DB search
MNTYPALGEHDGHSQHDGGGARGHDAGSDALLEGLNPQQREAVVHAGSPLLIVAGAGSGK
TAVLTRRIAYLLAERGVTPGQILAITFTNKAAAEMRERVAALVGPRANAMWVSTFHSSCV
RILRAQAALLPGLNSNFSIYDSDDSRRLLTMISKDLELDTKRFSARLLATHISNLKNELV
GPEEAVVAADQDPAELPRLIAKVYGHYQQRLRAANALDFDDLIGETVALLQAFPQIAEYY
RRRFRHVLVDEYQDTNHAQYMLVRELVGGAGESDHAVAPAELCVVGDADQSIYAFRGATI
RNIEEFERDYPDARTILLEQNYRSTQNILSAANSVISKNTGRREKRLWTDSGEGELIVGY
VADNEHDEASFVASEIDRLVDQGETKFADIAVFYRTNNSSRALEEIFIRLGVPYKVVGGV
RFYERKEVRDIVAYLRVLANEDDTVSLRRILNTPRRGIGDRAEACVAVHSEHRNISFAAA
LRDGAEGKVALLNTRSQKAIASFLEMMDGLRALLPTAAADEDEPFELGDIGEVAEAVLER
TGYRAELAASSDPQDGARLDNLNELVSVAREFSSDARNAAGLIDPDDEETAAMREGEPDP
GSLAAFLERVSLVADADQLPDSDDGVVTMMTLHTAKGLEFPVVFVTGWEDGQFPHMRALG
DPAELSEERRLAYVGITRARQRLYLTRAIMRSAWGQPIQNPASRFIQEIPEDLINWRRED
PGTGGGFGSGRPGYGSGSRYGSQGGQGYGGGQNYGGGSGKAASTPSFGAARGRNNVLVLA
TGDRVSHDKYGLGTVLETKGTGPTATVTIDFGSAGKVRLMLIGGVPMVKL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgtacccagcactcggtgagcacgacggacattcccagcacgacgggggcggc
gcgcggggacacgacgcgggttcggacgccctcctcgagggtctcaacccgcaacagcgc
gaggccgtggtccatgctggttcgccgttgctgatagtcgcgggagccggctcgggcaag
actgcagtgctgacgcgtcgcatcgcctatctgttggccgaacggggtgtcacccccggt
cagatcctggccatcacgttcaccaacaaggctgcggccgagatgcgcgagcgtgtggca
gctcttgtcggaccgcgtgccaacgccatgtgggtatcgacgttccactccagttgcgtg
cggatcctgcgagcacaggcggcgctcctacccggtttgaactcgaatttctcgatctac
gattccgacgattcgcgtcgactgctgacgatgatctcgaaggacctcgagctcgacacc
aaacgattctccgcgcgccttctcgccactcacatctccaacctgaagaacgaactcgtc
ggaccggaagaggcggttgtcgcagccgatcaggatccggccgaacttccgcgactgatc
gccaaggtctacggccactaccaacagcggctgcgtgcggcgaacgcactcgacttcgac
gatctcatcggtgagaccgtcgcgcttcttcaggcgtttccacagatagccgagtactac
cgccgccgcttccgtcacgtgctcgtcgacgagtaccaggacaccaaccacgcgcagtac
atgcttgtgcgtgaactggtcggcggtgccggcgagtccgaccacgccgttgccccggcc
gaactgtgcgtcgtcggtgacgccgatcagtcgatctacgcattccgcggagccactatc
cgcaacatcgaagagttcgaacgcgactacccggatgctcggaccatccttctcgaacag
aactaccgttcgacgcagaacattctgtctgcggccaactccgtgatttccaagaacacc
ggtcgacgagaaaagcgtctgtggaccgattcgggtgaaggcgaactgatcgtcggctac
gttgcagacaacgagcacgacgaagcatcgtttgtcgcctcggagatcgatcggctggtg
gaccagggcgagaccaagttcgccgacatcgcggtgttctaccggaccaacaactcctcg
cgcgcgctcgaggagatcttcattcgactcggagtgccgtacaaggtggtcggcggcgtt
cgcttctacgagcgcaaggaagttcgggacatcgtcgcgtatctgcgcgtcctcgccaac
gaggacgacaccgtgagcctgcgacgcattctcaacacgccccgacgcggtatcggtgat
cgagccgaagcctgcgtcgccgtgcactccgagcatcgcaacatcagcttcgccgccgct
ctccgtgacggcgcggaaggcaaagtggcgctgctcaatacgcggtcacagaaggccatc
gcgtcgttcctcgagatgatggacgggctgcgggccctgctaccgacagcggccgccgac
gaggacgaaccgttcgagctcggtgacatcggtgaggttgccgaggcggtgctcgagcgc
accggctaccgcgccgagcttgcggcgagcagcgatccgcaggatggcgcgcgactcgac
aacttgaacgaactcgtcagcgtggcaagggaattcagttccgacgcgcgaaacgcggcc
gggctgatcgatccggacgacgaggaaaccgcagcaatgcgtgaaggtgaacccgatccg
ggttcgcttgccgccttcctcgaacgggtatcgcttgtcgccgacgccgatcaactgccg
gactccgacgacggcgtcgtgaccatgatgacgcttcacaccgccaagggcctcgagttc
ccggtcgtcttcgtcaccggttgggaggacgggcagttcccgcacatgcgcgccctcggc
gatccggcggagctgtccgaagagcgtcgacttgcttacgtcggcatcacccgtgccagg
cagcgcctgtacctgacgcgcgcgatcatgcgttcggcgtgggggcaaccgatccagaac
ccggcgtcgcggttcatccaggagatcccggaggacctgatcaactggcgtcgtgaggat
ccgggcaccggtggcggattcggaagcggcaggccgggttacggcagcggaagccgctac
ggcagccagggcggccagggatacggcggcgggcagaactacgggggagggtccggcaag
gccgcgtcgactcccagtttcggtgccgcgcgtggccgcaacaacgttctggtcctcgcc
acgggtgaccgcgtcagtcacgacaagtacggtctgggcaccgtgttggaaaccaagggc
actggccccaccgcgacggtcaccatcgacttcggtagcgcgggcaaggtgcggttgatg
ctcatcggcggtgtgccgatggtcaagctgtag
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