Rhodococcus sp. DN22: RA302_00380
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Entry
RA302_00380 CDS
T09949
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RA302_00380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhoo02000
]
RA302_00380
Transporters [BR:
rhoo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RA302_00380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
AAA_21
AAA_13
SMC_N
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WVX70729
LinkDB
All DBs
Position
96760..97749
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AA seq
329 aa
AA seq
DB search
MTASVDTRKPETVDAALTVEDLVVEFNVGKGQTVHAVSGISFTVAPGETLGVVGESGCGK
STAGRAIMQLPSPTSGSIRLGETEMTALGAEELRRSRTQLQMIFQDPISSLNPRRKVKAL
ITEGPSIWGGKDKAAIEARAREVLAEVGLDPDMVWDRTPRELSGGQCQRVCIARALMVDP
KVLICDEPVSSLDVSVQAQILNLLEDAKKRHGLSLLFIAHNMAVVKNISDRVMIMYLGRV
CEIVPAEDMQNRALHPYTQLLLASIPDPDATVTAAQNVEQKVIELPSPLNPPSGCRFRTR
CPLATDLCAEEVPELRLVEGGHQVACHHV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatcagtggataccagaaagcctgagacggtggacgcggccctgacggtcgag
gacttggttgtcgaattcaacgtcggcaaggggcagaccgttcacgccgtgtccggaatc
agtttcaccgtcgcgccgggcgaaaccttgggcgtggtcggtgaatccggctgtggcaag
tccacggcgggccgggcgatcatgcagttgccctcaccgacgtcgggctcgatccgcctc
ggagagacggaaatgacggcactgggtgcggaagaattgcgtcgcagccgcactcagctg
cagatgatcttccaggacccgatctcctcgctgaacccacgacgcaaggtcaaggctctc
atcaccgagggtccgtcgatctggggcggaaaagacaaggccgccatcgaagctcgggcg
cgcgaggttcttgccgaggtcgggctggacccggacatggtgtgggaccgaaccccacgc
gaactctcgggtggtcagtgccagcgcgtgtgcatcgcccgcgcattgatggtcgacccc
aaggtcctgatctgtgacgagccggtctcgagtctcgacgtctccgtgcaggcgcagatt
ctgaacctgctcgaggacgcgaagaagcgtcacgggctgtcgctgctgttcattgcgcac
aacatggccgtcgtgaagaacatcagtgaccgcgtgatgatcatgtacttgggccgcgtc
tgcgaaatcgttcccgcagaagacatgcagaaccgcgcgctgcacccgtacacgcagcta
ctgctggcgtcgattcccgatcccgacgccaccgtcaccgcggcgcagaacgtcgagcag
aaggtcatcgaactgccctcgccgctcaatccgcccagtggctgccgcttccgcacgcgg
tgcccgctggctactgatctctgcgccgaggaagttcccgagctgcgtctcgtcgagggc
ggccatcaggtggcgtgccaccacgtgtga
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