Rhodococcus sp. DN22: RA302_01660
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Entry
RA302_01660 CDS
T09949
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rhoo
Rhodococcus sp. DN22
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoo03400
]
RA302_01660
DNA repair and recombination proteins [BR:
rhoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
RA302_01660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
WVX70969
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All DBs
Position
complement(363303..363707)
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AA seq
134 aa
AA seq
DB search
MPATDPATSARMSAQRRRDTKPEIALRRELHRRGLRYFVDRAPVKGVRRRADLVFPRRKV
AVFVDGCFWHSCPQHATFPKNNAQWWTDKLAANVVRDRDTDARLAEQGWTVIRIWEHEDP
LVAAERVQKALLGP
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgcgacggatcctgccaccagcgctcggatgagcgctcagcgtcggcgcgacacc
aaacctgaaattgcacttcgacgcgagcttcatcggcgcggactccggtacttcgttgac
cgggcgcctgtcaaaggtgttcgccgacgcgctgatctggtgtttccgcgccgcaaagtc
gcggtgttcgtggacggatgcttctggcacagctgcccgcagcatgcgacgtttcccaag
aacaacgcgcagtggtggacggacaagttggccgccaacgtggttcgagaccgcgacacc
gatgcacgtctggcagagcagggttggaccgtcatccgcatctgggagcacgaagatccg
ctggtagcagccgaacgcgtccagaaagccctgctcggtccgtaa
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