Rhodococcus sp. DN22: RA302_02965
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Entry
RA302_02965 CDS
T09949
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RA302_02965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhoo02000
]
RA302_02965
Transporters [BR:
rhoo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RA302_02965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WVX71208
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All DBs
Position
647305..648912
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AA seq
535 aa
AA seq
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MKARSVSATAVISVGVFTLAGCGGASSPEGSVGEYAKDGSFTTVINADPGNLHPLITNLT
STQIVNAYSYDSLIDIDAQTRTVRPYLAESWSEEGNTLKFVLKKGITCADGTSFTAQTAA
DDINWVMDPENASPLRGSTVPMSTSASADGDELTVTTAEPAPFLLSRIGALRLPCAATLE
DPASIRSSSNGTGLFKVTEVVPNDHITMERRDGYTWSPNGETTSDTLGVPKTVTIKIVTD
PSTTANLVLTGGVNAAAVTGSDEERVLAAGLDSKTYTTLSGEFIFNHFAALPTADRAVRQ
ALVQAVDLDDYTEITTGGKGTRARALAVSEPLACDYNSVEGTIPDFDVDAAKKTLSDAGW
KAGPDGLLTKDGRPLALNVIFNNSRDTNSAAAEYVATQWEGLGAKVKLTGGDYSFVIADT
FSTTDLSSWDVSIGLTLGSDTPSIFAKYFTGPPKPEGVNFASLDNKKYIELSTEASLLPG
DESCKVWEESERALFNDIDLLPVSTTPAHMFFNGATSIYPPSSGILPGSAIRVLK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcccgttctgtctccgcgacagcagttatcagcgttggcgttttcaccctggcc
gggtgtggcggcgcatccagtcccgaaggttcagtcggtgagtatgcaaaggacggcagt
ttcacgactgtgatcaacgccgatcccggaaatctgcaccctctgatcaccaaccttacg
tcgactcagatcgtgaacgcgtactcgtacgattcgttgatcgacatcgacgcgcaaaca
cgcactgtgcgtccctatctggcggagagctggagtgaagaagggaacacgctgaagttc
gtgctcaagaagggcatcacttgtgccgacggcacttccttcaccgcacagaccgcggcc
gatgacatcaactgggtcatggatcctgaaaacgcttcaccgctacgcggatccactgtg
ccgatgtcgacttcggcctcagcggacggtgacgaactgacggtgactaccgccgagcca
gcgcccttcctgctctctcgaatcggcgcgttgaggcttccgtgcgctgcgacgctcgaa
gacccggccagcatccgttcgagtagcaacggaacgggtctgttcaaggtcaccgaagtt
gttccgaacgatcacatcacgatggaacgccgcgacggttacacctggagtccgaacggc
gagaccacttccgacactctcggagtgccgaagacagtgacgatcaagattgtcaccgat
cccagtacgacggcgaatcttgttctcaccggcggagtgaatgccgcagcggtcaccggt
tcggacgaggaacgagtcttggccgcgggtctggattcgaagacctacaccacgttgtcc
ggcgagttcatcttcaatcatttcgcggccctacccacggcagaccgtgctgtgcggcag
gccctcgtgcaggcagtagacctggacgactacaccgagatcaccaccggcggtaaagga
acccgtgcacgcgccctcgcggtttcggaaccccttgcctgcgactacaacagtgtcgaa
gggacgatccccgatttcgacgtcgatgcagcaaagaaaacgctgtccgacgcaggttgg
aaggcgggtcccgacggcctcctgacgaaggacggtcgaccgcttgccctcaacgtaatt
ttcaacaactcacgcgatacaaactctgccgccgcggaatacgtagcaacacagtgggaa
ggactgggcgcgaaggtgaaactgactggcggcgactacagtttcgtcattgccgacaca
ttcagcaccaccgacctgtcgtcgtgggacgtttccatcggtttgacgctggggagtgat
acgccgagcatctttgcgaagtacttcaccggcccgcccaaacctgaaggagtgaacttc
gcttccctcgacaacaagaagtacatcgaattgtccactgaggcttcgcttcttcccggt
gacgagtcctgcaaggtctgggaggaaagtgagcgcgcgttgttcaacgacatcgacctg
ctgccggtatccacgactcccgctcacatgttcttcaacggcgcaacgtcgatctacccg
ccgtcgagcggaatccttccgggctcggcgatccgtgtcctgaagtag
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