Rhodococcus sp. DN22: RA302_03020
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Entry
RA302_03020 CDS
T09949
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo00750
Vitamin B6 metabolism
rhoo01100
Metabolic pathways
rhoo01240
Biosynthesis of cofactors
Module
rhoo_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
RA302_03020 (pdxS)
Enzymes [BR:
rhoo01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
RA302_03020 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NMO
NanE
IGPS
TetR_C_27
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
WVX71218
LinkDB
All DBs
Position
complement(663524..664441)
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AA seq
305 aa
AA seq
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MTHSLADIPSTSAALGTARVKRGMAEMLKGGVIMDVVTAEQAKIAEDAGAVAVMALERVP
ADIRAQGGVSRMSDPDMIDSIISTVSIPVMAKARIGHFVEAQILQSLGVDYIDESEVLTP
ADYANHIDKWKFTAPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATTHMRTIRG
EIRRLTSLSEDELYVAAKELQAPYELVVEVAKAGKLPVTMFTAGGIATPADAAMMMQLGA
EGVFVGSGIFKSGNPKQRAEAIVKATTFYDDPDVLAKVSRGLGEAMVGINVDDLPVGHRL
AERGW
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacgcattcattggcagatatcccgtccacctcagctgcactcggcaccgcacgcgtc
aagcgcggcatggctgaaatgctcaagggcggtgtgatcatggacgtggtcaccgctgag
caggccaagatcgccgaagacgccggcgccgtcgccgtcatggcactcgagcgggtcccc
gcagacattcgcgcacagggcggcgtctcgcgcatgagcgacccggacatgatcgacagc
atcatctccaccgtcagcatccccgtcatggccaaggcacgcatcggtcacttcgtcgaa
gctcagatcctgcagagcctcggcgtcgactacatcgacgagtccgaggtcctgaccccg
gccgactacgccaaccacatcgacaagtggaagttcaccgctcccttcgtgtgtggcgcc
accaacctcggtgaagcgctccgtcgcatcaacgaaggcgcggccatgatccgctcgaag
ggtgaagccggcaccggagacgtctccaacgccaccacacacatgcgcaccatccgcggc
gagatccgccggttgacctcgctgagcgaggacgaactgtacgtagccgccaaggaactg
caggccccgtacgaactggtcgtcgaggtcgccaaggcaggcaagctgcctgtcaccatg
ttcaccgccggcggcatcgccacccccgcagacgctgcgatgatgatgcagctcggcgcc
gaaggcgtgttcgtcggatcaggtatcttcaagtccggcaacccgaagcagcgcgccgag
gcaatcgtcaaggccaccacgttctacgacgacccggacgtgctcgccaaggtctcgcgc
ggactcggcgaggcaatggtcggcatcaacgtcgacgacctacccgtcggacaccgcctc
gcagagcgcggctggtag
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