KEGG   Rhodococcus sp. DN22: RA302_07705
Entry
RA302_07705       CDS       T09949                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rhoo  Rhodococcus sp. DN22
Pathway
rhoo00010  Glycolysis / Gluconeogenesis
rhoo00020  Citrate cycle (TCA cycle)
rhoo00260  Glycine, serine and threonine metabolism
rhoo00280  Valine, leucine and isoleucine degradation
rhoo00310  Lysine degradation
rhoo00380  Tryptophan metabolism
rhoo00620  Pyruvate metabolism
rhoo00630  Glyoxylate and dicarboxylate metabolism
rhoo00640  Propanoate metabolism
rhoo00670  One carbon pool by folate
rhoo00785  Lipoic acid metabolism
rhoo01100  Metabolic pathways
rhoo01110  Biosynthesis of secondary metabolites
rhoo01120  Microbial metabolism in diverse environments
rhoo01200  Carbon metabolism
rhoo01210  2-Oxocarboxylic acid metabolism
rhoo01240  Biosynthesis of cofactors
Module
rhoo_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rhoo_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhoo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rhoo_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rhoo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RA302_07705 (lpdA)
   00020 Citrate cycle (TCA cycle)
    RA302_07705 (lpdA)
   00620 Pyruvate metabolism
    RA302_07705 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    RA302_07705 (lpdA)
   00640 Propanoate metabolism
    RA302_07705 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RA302_07705 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    RA302_07705 (lpdA)
   00310 Lysine degradation
    RA302_07705 (lpdA)
   00380 Tryptophan metabolism
    RA302_07705 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RA302_07705 (lpdA)
   00670 One carbon pool by folate
    RA302_07705 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhoo04147]
    RA302_07705 (lpdA)
Enzymes [BR:rhoo01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RA302_07705 (lpdA)
Exosome [BR:rhoo04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RA302_07705 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_binding_3 Pyr_redox_3 DAO FAD_oxidored FAD_binding_2 GIDA HI0933_like NAD_binding_8 Thi4 3HCDH_N ApbA AlaDh_PNT_C Amino_oxidase
Other DBs
NCBI-ProteinID: WVX72097
LinkDB
Position
1667826..1669229
AA seq 467 aa
MTSHYDVVVLGAGPGGYVAAIRAAQLGLSTAIIEQKYWGGVCLNVGCIPSKALLRNAELA
HIFTKEAKTFGMSGDVSFDFGSAFDRSRKVADGRVKGIHFLMKKNKIPEYDGKGTFVDAN
TISVELSKGGTETITFDNAIIATGSYTKLLPGTSLSENVVTYEEQILTRDLPGSILIVGA
GAIGMEFGYVLKNYGVDVTIVEFLDRALPNEDADVSKEIAKQYKKLGVTIKTGAAVQSIS
DDGSKVTVSIKDNKSGEIETVVVDKVLQSVGFAPRVEGFGLENTGVALTDRGAIAIDDYM
RTNVPHIFAIGDVTAKLQLAHVAEAQAVVAAETIGGAETQTLGDYRMMPRATFCQPQVAS
FGLTEEQAKAEGYDVKVANFPFAANGKAHGLGDPTGFVKLIADKKYGELLGGHLIGPDVS
ELLPELTLAQKWDLTVNELARNVHTHPTLSEALQEAIHGLAGHMINF
NT seq 1404 nt   +upstreamnt  +downstreamnt
gtgacctcacactatgacgtcgttgtcctcggagccggccccggtgggtacgtcgctgct
atccgcgcggcacaactgggcctgagcaccgccatcatcgagcagaagtactggggcggt
gtatgcctgaatgtcggctgcattccgtccaaggcgcttctccgtaacgccgaactcgcg
cacatcttcacgaaagaagcgaagacgttcggcatgtccggagacgtgtccttcgatttc
ggctccgctttcgatcgcagccgcaaggtcgcggacgggcgagtcaagggcattcacttc
ttgatgaagaagaacaagatcccggagtacgacggcaagggcacgttcgtcgacgccaac
accatcagcgtggagctgagcaagggtggcaccgagacgatcacgttcgacaacgcgatc
atcgcgacgggttcgtacaccaagctgctgcccggcacctcgctgagcgagaacgtcgtg
acctacgaagagcagatcctcacccgtgaccttccgggttcgatcctgatcgtcggtgcc
ggcgcgatcggcatggagttcggttacgtcctcaagaactacggcgtcgacgtcacgatc
gtcgagttcctcgatcgggcactgcccaacgaggacgccgacgtctcgaaggaaatcgcc
aagcagtacaagaagctcggcgtcaccatcaagaccggtgccgctgtgcagtccatcagc
gacgacggcagcaaggtcaccgtctcgatcaaggacaacaagtccggcgagatcgagacc
gtggtcgtcgacaaggttctgcagtccgtcggcttcgcaccgcgtgtggagggcttcggt
ctcgagaacaccggggtcgcgttgaccgatcgcggcgccatcgcgatcgacgactacatg
cgcaccaacgtcccgcacatcttcgccatcggtgacgtcaccgccaagctgcagctcgcg
cacgtcgcagaagctcaggctgtcgtcgctgccgagaccatcggcggcgcggagacgcag
acactcggtgactaccggatgatgccgcgtgcgacgttctgccagccgcaggtcgcctcg
ttcggtttgaccgaggagcaggccaaggccgagggctacgacgtcaaggtcgcgaacttc
ccgttcgccgccaacggcaaggcacacggtctcggtgacccgaccggtttcgtcaagctg
atcgccgacaagaagtacggcgaactgctcggcgggcacctcatcggaccggacgtttcg
gaactgctgcccgagctgaccttggcccagaagtgggacctcacggtcaacgagttggca
cgcaacgtccacacccaccccacactcagtgaggcactgcaggaagcgatccacggcctc
gcaggccacatgatcaacttctga

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