Rhodococcus sp. DN22: RA302_10040
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Entry
RA302_10040 CDS
T09949
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase family protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo00550
Peptidoglycan biosynthesis
rhoo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RA302_10040
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhoo01002
]
RA302_10040
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhoo01011
]
RA302_10040
Enzymes [BR:
rhoo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RA302_10040
Peptidases and inhibitors [BR:
rhoo01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RA302_10040
Peptidoglycan biosynthesis and degradation proteins [BR:
rhoo01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RA302_10040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Transpeptidase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
WVX72536
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Position
complement(2204224..2205537)
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AA seq
437 aa
AA seq
DB search
MMWRRKCAVAVAGTVLSGSIAFTGVVGTSGVAGAQPAPPPPTTTTEAPFTTPNTDSCPFM
SSPAPAIDLSEAPAPGSTAPTAVPIPESPVGGDKLGECGVVLPDGAPPLPADIAASGWVL
ADAETGEVLAAKDPHGRYRPASTIKMLLALVALDELDLDTEITATAEDADAEGSAVGIGK
GGKYTNRQLMQGLVMASGNDAAHALARQLGGDAAAVSKMNALAAELGALDTRTATPSGLD
GPGMSSSPYDLAVIFHTALQNPTFAGLIHTETVEFPGFPKDPTIPDDQDRPGFTLANDNQ
LLYNYDGALGGKTGFTDDARHTYVGAAERNGRKLLVTLMGGEAKPIRPWEQAARLLDYGY
ALPASTTVGSLTDRSTDDATPDVTRTPSAAAPGSISAAPTATDTESDTTDRILIGAVGGV
VVIALVAGAVALNRRRR
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggcgtcgaaagtgtgcagtggcagtggccggaacagtgctctcagggagcatt
gcgtttaccggtgtcgtagggacctcgggagtggccggcgcccaaccggccccgccgccg
cccaccaccaccaccgaggcaccgttcacaacacccaacaccgacagctgcccgttcatg
agtagcccggcgccggcgatcgatctctccgaagcacccgcgcccggatccacggccccg
actgccgtcccgattccggaaagccccgtcggtggagacaagctcggcgagtgtggcgtc
gtacttcctgacggcgctcccccgctcccggccgacatcgcggcatccggatgggtactc
gcggacgccgaaaccggtgaggtcctcgccgcgaaagatccgcacggtcgctaccgaccg
gccagcaccatcaagatgctgttggctctcgtcgcgctcgacgaactcgatctcgacacc
gaaatcaccgcaactgccgaagacgcggacgctgaaggtagcgctgtcggcatcggcaag
ggcggcaagtacaccaaccggcaactgatgcagggtctggtcatggcatcgggaaacgat
gccgcgcacgctcttgcccgccaactcggcggtgacgccgcagccgtgtcgaaaatgaac
gcactcgcggccgaactcggcgccctcgacacccgcacggcaactccatccggactcgac
ggcccagggatgagcagctcaccgtacgacctggccgtaatcttccatacagccctccag
aatccgacgtttgccggactgatccataccgaaaccgtcgagtttcccggcttccccaaa
gatccgacgattcctgacgatcaggaccgccccggattcactctcgcgaacgacaatcag
ttgctctacaactacgacggcgcattgggcggcaagaccggcttcaccgacgacgcccgc
cacacgtacgtcggtgctgcggagcgcaacggccggaaactactggtgacattgatgggc
ggcgaagccaagccgatccggccgtgggagcaggctgcccgtctactcgactacggatat
gcactccccgcgagcacaaccgtcggctcgttgacggaccgatcgaccgacgatgccacg
cccgatgtcactcgcacaccgtctgccgctgcaccaggctcgatttcggcagcacccacc
gctaccgacaccgagtcggacaccactgaccgcatcctcatcggtgctgtcggcggagtt
gtggtgatcgcgctggtggcgggagccgttgccctgaaccgtcgaaggcgctag
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