Rhodococcus sp. DN22: RA302_11015
Help
Entry
RA302_11015 CDS
T09949
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo03420
Nucleotide excision repair
rhoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RA302_11015
03430 Mismatch repair
RA302_11015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoo03400
]
RA302_11015
Enzymes [BR:
rhoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RA302_11015
DNA repair and recombination proteins [BR:
rhoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RA302_11015
MMR (mismatch excision repair)
Other MMR factors
RA302_11015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
C1_1
Motif
Other DBs
NCBI-ProteinID:
WVX73518
LinkDB
All DBs
Position
2407230..2409368
Genome browser
AA seq
712 aa
AA seq
DB search
MMVPMPADTGLDPEQSAAVLAPRGPVCVLAGAGTGKTRTITRRIAHLVADGHVSAGQVLA
VTFTARAAGEMRGRLRELGVGGSGPQVQARTFHAAALRQLKYFWPQVIGDTPWRLLDRKF
AVVSSAAARVGLSTSTESVRDLASEIEWSKASLIAPEDYPRAIAKIRREAPVEATKVAQV
YAAYEELKARGQDGMLLDFDDLLLHTAAALEEHSTVADEFRERYRCFVVDEYQDVTPLQQ
RVLDAWLGDRDDLTVVGDANQTIYSFTGATPNYLLDFSRKFPEATVVRLERDYRSTPEVV
SLANRVIGAARGRIAGTRLQLIGQRAPGPEPEFMEFDDEPAEALGVARAIKRLIAAGTPA
AEIAVLYRINAQSEAHEQALTKLGIPFQVRGGEGFFTRTEVRQAVAALRQAAGRDDLPEG
ADNGEALVSLVRAVLAPLGLTNEEPSGTQARERWASLSALVALTEEQLVHEPELSLTGLL
QELTARAEARHPPTVKGVTLASLHAAKGLEWDAVFLVGLNDGTLPIQHVLGDANSGADDV
AVEEERRLLYVGVTRAREHLQLSWALARNEGGRKSRRRSRFLNGLIPEDSPASRVAAPSS
GNKKRPRCRVCGKPLIGTSATMLGRCEKCPSNVDLELLEHLKAWRLDKSRELKVPAYVVF
SDNTLMAIAEQRPQDNRGLVSIPGIGPKKLDNFGEDVLAVIRGELRAATLDI
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgatggtccccatgcctgcggacaccggactggatccagaacaatcggccgccgtgctc
gcgccacgcggcccggtatgtgtcctcgcgggcgctggaacaggcaaaacccgcaccatt
acccgccggatcgcgcatctggttgccgacggccatgtctccgccggccaggtgcttgcc
gtgacattcacagcgcgagcggccggcgaaatgcgtggacggcttcgtgagctgggggtt
ggtggaagtgggccgcaggtacaggctcgcaccttccacgccgccgctcttcgtcaactc
aagtacttctggccgcaggtgatcggtgacacgccgtggcgtctgctcgatcggaagttc
gcggttgtcagcagtgccgccgctcgtgtcgggttgtccaccagtacggaaagcgtgcgc
gacctcgccagcgaaatcgagtggtccaaggcctcactgatcgcgcccgaggactaccca
cgcgcgatagccaagattcgtcgcgaggcgccggtcgaggccaccaaggttgcgcaggtc
tacgcggcatacgaagagctgaaggcacgtggccaggacggaatgctcctcgatttcgac
gatctcctacttcacaccgcggctgcgctcgaagagcattcgacggttgccgacgagttc
cgcgagcggtaccgctgcttcgtggtcgacgagtatcaggacgtcaccccgctgcaacag
cgggtgctcgacgcctggctcggcgaccgcgacgacctgaccgtggtgggcgatgcgaat
cagaccatctactccttcaccggcgccaccccgaactatctgttggatttctcgcggaaa
ttccccgaagcgaccgtcgtccggctcgaacgggactaccgctccacccctgaggtcgtg
tcgctggcgaaccgcgtgatcggtgcagcgcgcggacggatcgccgggacgcgtcttcag
ttgatcgggcaacgcgctccggggcctgagccggagttcatggagttcgacgacgagcct
gccgaagcgctcggcgttgcgcgggcgatcaaacggctgatcgcggcaggcactccagcg
gccgagatcgctgttctgtatcggatcaatgctcagtcggaggcgcacgagcaggcactc
accaagctcggcattccgttccaggtgcgtggtggagagggcttcttcacccgcaccgag
gtccgtcaggcagtggcggcactgcgtcaggccgccggacgagacgacctccccgaaggc
gcagacaacggcgaagcgctggtttcactggttcgcgctgtactcgcgccactcggtctg
accaacgaagaaccttcgggcacgcaagcccgcgagcgctgggcgtcgctctcggctctc
gtggcgctgaccgaagaacaactcgtccacgaacccgaactgtcgctcaccgggcttcta
caggagctaacagcccgagccgaggcgcggcacccaccgaccgtgaagggcgtgacgttg
gcttcccttcacgcggccaaggggctcgaatgggatgcggtgttcctggtcggcctcaac
gacggcaccctgccgatccaacacgttctcggcgacgccaattcgggcgccgacgacgtc
gcggtggaggaggagcgtcggcttctgtacgtgggggttacccgcgcccgcgagcatctg
cagctgtcttgggcattggctcgcaatgagggtggacgcaagtcccgtcgccggtcgagg
ttcctcaacgggctcatccccgaggactcaccggcttcgcgcgttgccgcgccgtcgtcg
gggaacaagaagcgtccgcgctgccgcgtctgcggcaaaccgttgatcgggacgtcggcg
acaatgctcgggcgctgcgaaaaatgcccgtccaatgtcgacctggaattgctcgagcac
ctcaaggcctggcgtctggacaagtcccgagaactcaaagttccggcctatgtcgtcttc
agtgacaacacactgatggctattgccgaacaacgaccacaggacaatcgtggactggtt
tcgatccctggaatcgggccgaagaaactcgacaacttcggagaagacgtactagctgtc
attcgcggcgaactgcgtgcggcaacactcgatatctga
DBGET
integrated database retrieval system
