Rhodococcus sp. DN22: RA302_13135
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Entry
RA302_13135 CDS
T09949
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rhoo
Rhodococcus sp. DN22
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhoo03016
]
RA302_13135 (miaB)
Enzymes [BR:
rhoo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
RA302_13135 (miaB)
Transfer RNA biogenesis [BR:
rhoo03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RA302_13135 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
WVX73549
LinkDB
All DBs
Position
2850915..2852462
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AA seq
515 aa
AA seq
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MSPALPEPTAVPEATATPVRTYEVRTYGCQMNVHDSERLSGLLEDAGYSKAETGTDPDLV
VFNTCAVRENADNKLYGNLSQLAPNKEANPDMQIAVGGCLAQKDRDTVVKKAPFVDVVFG
THNIGSLPALLDRARHNQRAEVEILDALEAFPSTLPAKRESAYAGWVSISVGCNNTCTFC
IVPALRGKEVDRRPGDILAEVQALVDEGVSEVTLLGQNVNAYGVSFADPEQPRDRGAFAS
LLKACGHIDGLERVRFTSPHPAEFTDDVIEAMATTPNVCPQLHMPLQSGSDKVLKAMKRS
YRKSKYLGIIEKVRAAMPHAAITTDIIVGFPGETEEDFQETLDVVRKARFSNAYTFQYSK
RPGTPAAEMADQLPKEVVQERYMRLLAVQEEVNIEENRKLVGTEVELLVAAGEGRKNAAT
HRLSGRARDGRLVHFRPEGNLDGTIRPGDVVTVVVTHGAPHHLVADDGVLTHRRTRAGDS
FEKGITPKTPPIGVGLGLPKIGAPAPQPVQMGCNA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctgcacttccggagccgactgcagttccggaggcaactgctacgcctgttcgc
acctacgaggtgcggacgtacggctgtcagatgaacgtccacgattccgagcgactgtcc
ggtctgctcgaggacgccgggtattcgaaggcggagaccggaaccgatcctgatcttgtc
gtcttcaatacgtgtgcggtccgcgagaacgcggacaacaagttgtacggcaacctcagc
cagctcgccccgaacaaggaggcgaaccccgacatgcagatcgcggtcggtgggtgcctg
gcgcagaaggatcgtgacaccgtcgtcaagaaggcgccgttcgtcgatgtcgtcttcggc
actcacaacatcggctcgcttcccgcgctgctcgaccgtgcgcgccacaatcagcgcgcc
gaagtcgaaatcctcgacgcgctggaggcatttccgtcgacactgcccgccaagcgcgaa
tccgcctacgcgggttgggtttccatctcggtgggctgtaacaacacgtgcacgttctgc
atcgttccagctttgcgtggcaaggaagtggatcgacgtcccggcgacattctggccgag
gtgcaggcactcgtcgacgagggtgtctcggaagtgaccctgctcggacagaacgtcaac
gcctacggcgtgtcgttcgccgatccggaacaaccgcgcgatcgcggagccttcgcttcc
ctcttgaaggcatgtggacacatcgacggcctcgaacgggtcaggttcacatcgccgcac
ccggcagagttcaccgatgacgtcatcgaagctatggcaaccactcccaacgtctgcccg
caactgcacatgccgttgcagtccggttcggacaaggttctcaaggcgatgaagcgctca
taccgcaagtcgaagtacctcgggatcatcgagaaggtgcgcgccgcaatgccgcacgcc
gccatcaccacggacatcatcgtcgggttcccgggggagacggaagaggatttccaggag
acgctggacgtcgtgcgtaaggcgcgattctccaacgcctacaccttccagtactccaag
cgcccgggcacgccggcggcggagatggccgatcaactccccaaagaggttgtccaggaa
cgctacatgcgattgctcgcggttcaggaagaagtgaacatcgaggaaaatcgcaaactc
gtcggcaccgaggtagaactgctggtggctgcgggtgagggccgcaagaacgcagcgact
caccgtctcagcggtcgcgcgcgagacggccgcctggtgcatttccgacccgagggaaac
ctcgacggcacaatccgacccggcgacgtggtgacggtcgtcgtcacccacggagcaccc
catcacctcgtggcagatgacggagtgctcacacaccgtcggacccgcgccggtgattcg
ttcgaaaagggcatcacacccaagaccccgcccatcggcgtaggtctcggactaccgaag
atcggtgccccagccccacaacccgtccagatgggatgcaacgcatga
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